Triticum dicoccoides (wild emmer wheat): 119323691
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Entry
119323691 CDS
T07278
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119323691
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119323691
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119323691
NCBI-ProteinID:
XP_037453288
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All DBs
Position
6B:complement(286411224..286413168)
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AA seq
425 aa
AA seq
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MDRSLQWSRPASLLLLGAAFLAATAVASANPAYNPDPYSVVDHFNRAVHRSTSPRRALYS
EKKSKKPKYTGPCMATNPIDRCWRCRKDWATDRQRMARCAKGFGRETTGGLKGKIYIVTD
ANDDDFTNPRPGTLRWGAVQTEPLWIIFARDMVINASQEIIIQSDKTIDGRGAQVHVANG
GGLTIQHQNNVIINNLHVHGIVHTSGGNVSMTATHSTIRTRADGDGVSIFNATKVWVDHL
SMDNCEDGMIDVVAMSTAVTVSNTHLAHHNDVMLFGATDGKEEDKVMQVTVAFNHFGRGL
VQRMPRCRYGFFHVVNNDYTNWLMYAIGGSSAPTIVSQGNRYRAPPNMAAKEATKREYAA
ESEWKNWVWTSEGDLMINDAFFITSGGKISQKLNGKDLLKPKPGEYVRRLTRFAGPLDCN
AGSPC
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggatcggagcctccaatggagcaggccggcgtcgctgctcctcttgggggcggcgttc
ctggcggcgacggccgtagcgagcgccaacccggcgtacaaccccgacccctacagcgtc
gtggaccacttcaaccgcgccgttcacaggtcgactagcccgcgtcgtgcgctgtattcg
gagaagaagtcgaagaagccaaagtacacgggcccgtgcatggcgacgaacccgatcgac
cggtgctggcggtgccgcaaggactgggcgacggaccggcagcggatggcccgctgcgcc
aaggggttcggccgcgagaccaccggcgggctcaagggcaagatctacatcgtgaccgac
gccaacgacgatgacttcaccaacccgcggcccgggacgctccggtggggcgcggtccag
acggagccgctgtggatcatcttcgcgagggacatggtgatcaacgcgtcccaggagatc
atcatccagagcgacaagaccatcgacgggcgcggggcgcaggtgcacgtggccaacggc
ggtgggctcaccatccagcaccagaacaacgtcatcatcaacaacctccacgtgcacggc
atcgtacacacgtcgggcggcaacgtgtcgatgacggcaacccactccacgatccgtacc
cgcgccgacggcgacggcgtctccatcttcaacgccaccaaagtgtgggtggaccacctg
tccatggataattgcgaggacggcatgatcgacgtggtggccatgtccacggccgtcacc
gtctccaacacccacctggcccaccacaacgacgtgatgctcttcggcgccaccgatggg
aaggaggaggacaaggtgatgcaggtcaccgtcgccttcaaccacttcgggagaggcctg
gtgcagaggatgcctcgctgccgctacggcttcttccacgtcgtcaacaacgactacacc
aactggctcatgtacgccatcggaggcagcagcgcgcccaccatcgtcagccaggggaac
cgctacagagcaccacccaacatggctgccaaggaggcgaccaagcgcgagtacgcggcc
gagtcggagtggaagaactgggtgtggacatcggaaggcgacctgatgataaacgacgcc
ttcttcatcacgtccggcggaaaaataagccagaagctcaacggtaaggacctcctcaag
cccaagccaggggagtacgtcaggaggctcacccgcttcgccggcccgttggactgcaac
gcgggcagtccctgctga
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