KEGG   Triticum dicoccoides (wild emmer wheat): 119324059
Entry
119324059         CDS       T07278                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020  RNA polymerase
tdc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119324059
  09124 Replication and repair
   03420 Nucleotide excision repair
    119324059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdc03021]
    119324059
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119324059
Transcription machinery [BR:tdc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     119324059
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      119324059
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 119324059
NCBI-ProteinID: XP_037453688
LinkDB
Position
6B:complement(46225733..46226923)
AA seq 139 aa
MSGVEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKWEQLQHMSDGGADQVSQVFEKSQ
AYVKRFSRYKNPDAVRQVRETLSRYSLVEFELCTLGNLCPDTADEAKALVPSLVPGGRFD
SDDRVDKMLNDLSLIKKFE
NT seq 420 nt   +upstreamnt  +downstreamnt
atgtccggcgtggaggaggaggagaacgccgccgagctcaagatcggcgaagagttcctc
aaggccaagtgcctgatgaactgcgaggtggcgataatcctggagcacaagtgggagcag
ctgcagcacatgtcggacggcggcgccgaccaggtctcgcaggtgttcgagaagtcgcag
gcctacgtcaagcgcttcagccgctacaagaaccccgacgcggtccgccaggtccgcgag
acgctctcccgctacagcctcgtcgagttcgagctctgcaccctggggaacctctgcccc
gacaccgccgacgaggccaaggcgctcgtcccctccctcgtccccggcggcaggttcgac
agcgacgaccgcgtcgacaagatgctcaacgacctctccctcatcaagaagttcgagtag

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