Triticum dicoccoides (wild emmer wheat): 119324268
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Entry
119324268 CDS
T07278
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119324268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119324268
Enzymes [BR:
tdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
119324268
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
119324268
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
119324268
NCBI-ProteinID:
XP_037453929
LinkDB
All DBs
Position
6B:343203283..343210579
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AA seq
701 aa
AA seq
DB search
MAGSVGTGRVAPRSSPKRYNGMDPPLSLTRPTMFDLQKTAELEKFLVEAGLYESEEQSAK
REELLREIDGIVKEWVKQLTSQKGYSEQMIEKANVVLFTFGSYRLGVHGPGADIDILCVG
PSYVNREEDFFVTLHGILTQLEEVTELQPVPDAHVPLMKFKFHRMAIDLLYASVSLAVIP
PDFNISEGSVLCGVDESTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAERRGVYSN
VTGFLGGVNWAILVALICQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDLGFSV
WDPRKNPRDRSHVMPIITPGYPCMNSSYNVSSSTLRVIKEQFKLGNKICQEIDLNKASWT
ALFEPFIFFEAYTKYLVVDIVADNDDDLRLWKGWVESRLRQLTLKIERDTNGMLQCHPYP
CDYSNPTVQCAHCSFYMGLSRKEGMKIHGQNFDIRGTVDEFMHEIGMYTLWKSGMDLAVT
HVRKKQIPYYVFEQGYKKPCPPMHANQQEQSDRHDTEDDTLTASMLGQLKRKRDFDEAGH
SESCKSVKRSSVCLGYEESPPEYGSIVSKVVSENTVKLVSSALCNGVQNGLSHGNVNLES
ANCSSSPHGSEESAASGTSCAAVETVHMVYETVGPESSMACVINGMVQTMAVHTPLKCVA
EKDEPKFEGIGSLANSNSAEFMEQTEMLTGNVLGENMHLCE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatctgtgggcacaggcagggtagcacctcggtcgtccccaaagcggtacaac
ggcatggatccgccgttatctttgaccaggccgaccatgttcgatctgcagaagacggct
gagctcgagaagttcttggttgaagcgggcctttacgagagcgaggagcagtccgcgaaa
cgggaggagttgctacgggagattgatgggatagttaaggaatgggtgaagcagttaact
agtcagaaagggtattctgagcaaatgattgaaaaggcaaatgtagtccttttcactttt
ggatcttaccgcttgggggttcatgggcctggagcagacattgatatcttatgtgttgga
ccttcatatgtgaaccgagaggaggatttctttgtcacactacatggcatattaacacaa
ctggaagaagtgactgaactacaacctgtacctgatgctcatgtacctcttatgaaattt
aagttccacaggatggcaattgaccttctctatgccagtgtatctcttgcagtaatacca
ccagatttcaacatctctgaagggtctgtgctttgtggtgttgacgaatcaactgttcga
agtcttaatgggtgcagggtggcagaccagattcttcgacttgttccaaatgttgagaat
ttccggacaacactcaggtgtttgaagtactgggcagagagaaggggcgtttattccaat
gttactggtttccttgggggtgtcaactgggccatattggttgctcttatctgccaactc
tatcctaatgctgtaccaagtatgctggtctcaagattcttcagagtttttacgcagtgg
cagtggccgaatccagtgatgctttgtgccattgagaatgatgaccttggtttttctgta
tgggatccacgtaaaaatcctcgtgatagatctcatgttatgcctatcataactccaggc
tatccatgcatgaactctagctataatgtatcttctagcacattgagggttatcaaggag
caatttaagctcggtaataagatttgtcaggaaattgaccttaataaggctagttggact
gccttgtttgagccttttatttttttcgaggcatatacgaagtatctagtggttgacatt
gttgcggacaatgatgatgatcttcggctttggaagggatgggttgagtctcgactgagg
cagctgaccttgaagatagagcgggatactaatggaatgctgcaatgccatccttaccca
tgtgactattcaaatcctacagtacagtgtgctcattgctccttctacatgggcttatca
aggaaagaagggatgaaaatacatggtcaaaactttgatattcgtggaacggtagatgag
tttatgcatgaaatcggaatgtacacattgtggaagtctggaatggacctagcggtcact
catgttcgtaagaagcagatcccttattatgtatttgaacagggttacaagaaaccttgt
ccaccaatgcatgcaaaccagcaagagcagtctgatagacatgacactgaagatgacaca
ctgacagcatctatgttgggccaactaaagagaaagcgtgattttgatgaagctggtcac
agtgaatcatgtaaatctgttaaaaggtcttcagtatgcctaggctacgaggaaagtcca
cctgaatatggaagcattgtaagtaaagttgtatccgaaaacacagtcaaattggtttcc
agtgccctctgtaatggagttcagaatggactgtcgcatggcaatgtaaatttggaatca
gcaaattgctccagttcaccacatggatctgaggagtctgcagcatcaggcacaagctgt
gcagctgtggaaacagttcacatggtttatgaaactgttggtcctgaaagctcaatggca
tgtgttatcaatggtatggtccagactatggcagtgcacacacctttaaaatgtgtggct
gagaaagatgaacccaagtttgagggaattggtagcttggcaaacagcaattctgccgag
tttatggagcagacagaaatgctcactggaaacgtccttggtgagaatatgcacttgtgt
gaatga
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