Triticum dicoccoides (wild emmer wheat): 119324598
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Entry
119324598 CDS
T07278
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119324598
09122 Translation
03013 Nucleocytoplasmic transport
119324598
03015 mRNA surveillance pathway
119324598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119324598
03041 Spliceosome [BR:
tdc03041
]
119324598
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
119324598
Spliceosome [BR:
tdc03041
]
Common components
Common spliceosomal components
Cap binding complex
119324598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DUF5798
Zw10_N
ATG14
Motif
Other DBs
NCBI-GeneID:
119324598
NCBI-ProteinID:
XP_037454270
LinkDB
All DBs
Position
6B:complement(50051773..50071198)
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AA seq
863 aa
AA seq
DB search
MSAGWRTLLLRIGDRCPEYGGTADHKEHIEICYNVLSREYEHSKDDIFEFLLQCAEQLPH
KIPFFGVLIGLLNLENEDFAKGIVDATQANLQDALHTENRDRIRILLRFLCGLMCSKVIS
PNSIIETYETLLSSAATILDEDAGNASWQPRADFYVYCILASLPWGGSELFEQVPDELER
VLVGIQSYISIRRHFDDIAFSVFETDEGNSPNKKDFMEDLWERMQLLSRNGWKVKSVPKP
HLSFEAQLVVGKSHRFHPVSYPPPTFTMSSSEILKGQEMHEANLKYPQRLCRLHIFPTNK
AENMQPVDRFVVEEYILDVLLFFNGCRKECAFYLVSLPVSFRYEYLMAETIFSQLLLLPN
PPFRPIYYTLVIIDLCKALPAAFPSVVVAAVHALFDRISNMDTECRTRLILWFSHHLSNF
QFVWPWQEWANVKGLPKWAPQRVFVQEVLEREIRLSYFEKIKQSIEDAAELEGLLPPKAG
PNFRYHTDESKESTEGHRLSKELVSMVRGRKTTRDIILWAEEQIVPANGAKFAVDVVSQT
LLDIGSKSFTHLITVLERYGQIISKLCPDEEMQLLLMDEVSAYWKNSTQMTAIAIDRMMG
YRLISNLAIVKWVFSPANVNQFHVSDRPWEILRNTVSKTYNRISDLRKEIQTLRKSIQVA
KEASAKAIKELEEAKSILEIVEGQPVSSERPGRLRRLQGFADKAKEEEVTIEESLEAKQA
LLARGLEEGKELLRLLFKSFVDVLTERLPPVSADGDVPNLRTGDPNVTFPASDPEAATME
IDDENGADNNSQVNGENTEVGYTIGELEQWCLCTLGYLKSFSRQYATEIWSHIGMLDEEV
FVESIHPLIRKAAFSGLCRQMNQ
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctggctggaggacgctgctgcttcgcatcggcgacaggtgccccgagtacggg
ggaaccgccgaccacaaggagcacatcgaaatctgttacaatgtgctttctcgtgaatat
gaacactccaaagatgatatttttgagtttctccttcagtgtgcagaacaattacctcac
aagattcctttctttggagttttgataggtttgttaaatttagaaaatgaagattttgcc
aagggtatcgtggatgcaacacaagcaaacctacaggatgctttgcatactgaaaaccgt
gataggatcaggatattgctgcggtttctctgtggcctgatgtgcagcaaagttatatcc
ccaaattccattattgagacatacgagacacttttatcatctgctgcaactatattggat
gaggatgctggaaatgcttcttggcaaccacgtgctgatttttatgtttattgtattttg
gcttcccttccatggggtggttcagaattgttcgagcaagtcccggatgaacttgagagg
gttctggttggtatacagtcttacataagtatcagaaggcattttgatgatattgctttc
tcagtcttcgagacggatgaaggcaactctcccaataagaaggatttcatggaagatcta
tgggagcgtatgcaacttctttctcgtaatggatggaaggttaaaagtgttccaaaacct
cacttgtcgtttgaagctcagttagtagttggaaaatctcaccgtttccacccagttagt
tacccaccgcctactttcacgatgtcatcttctgagatattaaaagggcaagagatgcat
gaagccaatctaaagtatcctcaaaggctttgtaggctccatatatttccaacaaataaa
gctgagaatatgcaacctgtagaccgttttgttgttgaggaatacatattggatgtgctg
cttttcttcaatggatgtcgcaaagaatgtgcattttatctggtcagccttcctgtgtct
tttcggtatgaatacctgatggctgagaccatattttcacagctactattgctgccgaat
ccacctttcaggccaatctactatacgttggttatcatcgatctttgcaaggctttgcca
gccgcatttccatctgtggtggtagcagcagtacacgctctttttgacagaataagtaac
atggatacagagtgccgcaccagacttatcctatggttttcacatcatttgtcaaatttt
caattcgtttggccttggcaggagtgggccaatgtgaagggcctaccaaaatgggctcca
caacgtgtttttgtccaagaagtactagaaagggaaattcggttgtcctatttcgagaaa
atcaagcagagtattgaagatgctgctgagttggaagggttgttacccccaaaagctggc
cctaatttcagatatcatacagatgaaagcaaagaaagcaccgaaggccacaggctatcc
aaggaacttgttagcatggttagaggaaggaagactacacgtgatattattttgtgggct
gaggaacaaatagttcctgcaaatggagccaaattcgcagttgatgttgttagtcagaca
cttcttgacattggttcaaaaagtttcacccatcttatcactgttttggagagatatggt
caaataatttccaaactgtgcccagatgaggaaatgcagttattgttgatggatgaagtc
agtgcttactggaagaacagtacccagatgactgctatagctattgatagaatgatgggt
tatcgcttaatttccaacttggctatagtcaagtgggttttttctcctgctaatgtcaac
caatttcatgtgtcggatcgtccatgggagattcttaggaatactgttagtaagacatac
aatcgaatcagtgatcttcggaaggaaattcagacactgaggaaaagtattcaagttgct
aaagaggctagtgcaaaagccatcaaagaattggaggaggctaaatcaatacttgaaatc
gtagagggccaacctgtgtcatctgaaagaccaggcaggctgagacgacttcaaggtttt
gctgacaaagcaaaagaagaggaagtaactattgaagaatcgttagaggcaaagcaggct
ctccttgcccgggggcttgaagaaggcaaagaattgcttaggttattattcaagagcttt
gttgatgtgcttactgaacgcctgccacctgtttctgctgatggagatgttcctaaccta
cgcactggagatcctaatgtaacatttccagccagcgatcctgaagcggcaactatggag
atagacgatgaaaatggagcagataacaatagtcaagtgaatggtgaaaatacagaagtt
ggttatactattggagagcttgagcaatggtgcttatgcacattggggtatctaaagtca
ttttctcgacagtatgcaacagagatttggtctcacattggcatgttggacgaggaggtt
ttcgttgagagtattcaccctctcattcggaaagccgcattctccggtttgtgcagacag
atgaaccagtga
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