Triticum dicoccoides (wild emmer wheat): 119324975
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Entry
119324975 CDS
T07278
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase-like
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdc03016
]
119324975
Enzymes [BR:
tdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
119324975
Transfer RNA biogenesis [BR:
tdc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
119324975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_31
Methyltransf_23
Methyltransf_12
MetW
Ubie_methyltran
Methyltransf_8
CMAS
Motif
Other DBs
NCBI-GeneID:
119324975
NCBI-ProteinID:
XP_037454631
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Position
6B:complement(584151144..584153405)
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AA seq
379 aa
AA seq
DB search
MIQIFSRIAARSPRRVTSAPHPSSSKLHPGQFSRCSPVYRGGTAISTSNPMRSGDGNLEG
QDAAIAEGKDHGCSPGVQSTPDIEKKYVHRVYDAIAPHFSSTRFAKWPKVAGFLNSLKPG
SIVLDAGCGNGKYLGFNPECFYIGCDISPPLIEICAGRGHEVFVADAVNLPYRENVADAA
ISIAVLHHLSTEDRRRKAIEELIRVVKRGGLVLITVWAVEQEDKSLLNKWTPLCDKYNEE
WVDPGSPMVRNKSATTLDSIEETDEDTRAVKQTDDQLKNSYDGLEDKALIMDERDKTQQE
YFVPWHLPFHRAEIGGASAAALQNGLAKKDDKKGTVVYNRYYHIFVEGELQRLVAGMKNA
AIVDQFYDKSNWCLVLEKL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatccagatattttcgaggatagcagcaagaagccctcgccgagtcacctccgcaccg
catccgagtagctcgaagcttcatccgggacaattctctcgttgtagcccagtttaccga
ggtggtactgctattagcaccagcaatcccatgaggtctggtgatggaaacttggaaggc
caggacgcagccatcgccgaggggaaggaccacggctgctccccgggtgtccagtccacc
ccagacatcgagaagaagtacgtgcaccgcgtctacgatgccatagcccctcactttagc
tccacgcgcttcgccaagtggcccaaggtcgcggggttcctgaactcgctgaagccaggg
tccatcgtgctggatgccggctgcggcaatggcaagtacctgggcttcaatcctgagtgt
ttctacataggctgcgatataagcccgccacttatagagatatgcgcggggagggggcac
gaggtgttcgtcgctgatgccgtcaacctcccttacagggaaaacgttgctgatgccgcg
atttcgattgcggtgttgcatcatctgagtaccgaggacaggcggaggaaagccatagag
gagttgatccgtgttgtcaagagaggtggtcttgtgctgatcactgtctgggctgtggag
caggaagacaagtcgcttctgaacaagtggactcccttgtgcgacaagtataatgaagag
tgggttgatcccggtagtcctatggtgcgtaacaaatctgctactacgctagatagcatt
gaagagactgatgaagacacgcgcgccgtcaagcaaacagatgatcagctgaaaaatagt
tatgatggtttggaggataaggccttaattatggatgagcgtgacaaaacccagcaggag
tactttgttccttggcatctcccatttcaccgagcagaaattggcggtgcatctgctgct
gccctacagaatggattggcaaagaaagatgataagaagggtactgtggtatacaaccgt
tattatcacatttttgtcgaaggagaacttcaaaggctagttgctggcatgaaaaatgca
gccatcgtcgaccagttctacgacaaatccaactggtgcctagttctggagaagctttga
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