Triticum dicoccoides (wild emmer wheat): 119325056
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Entry
119325056 CDS
T07278
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1 homolog
KO
K28108
shortage in chiasmata 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdc03036
]
119325056
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119325056
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
119325056
NCBI-ProteinID:
XP_037454707
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Position
6B:complement(476582963..476590598)
Genome browser
AA seq
1704 aa
AA seq
DB search
MRTRFLAADYFSPAPAASCSDLALASLRFPPLPVPSLPPDPRFPFPLPFPAAADLPAVSI
SGDGLDSLPISSALSEFLAAVIPQPLPVPTTPAAYEGLDDFLYDRGVYSKGFSSRESVAL
KIPDGLDEISREKEGEGDGSISMSDRSGTSTDTKRWELLKEHIFEVAEVDLPQVLEGASF
GGDQSGDGVTLSFHVPDVKIHLDFIDIDTEMTLRYPTELAESIYQVEKIPVKHNDEEDLL
SGRTSNFSEIAALDCGVAIPQLEVSRHSWELNECPTKAEVSNIFHNLVEHLGEAQVQHPV
LNSTELLRSTDMDMLAFVSKDVPCADYQADKPMTVKAAVQMDLVRINDNVLLERNSALYP
LKPDGTFSDLPCSVLLEEVQITDFPSENVFRMLVQSDAAELNTSDEIFKDNFYQARRFYE
SVVSSELVLVDDTFRSLPTPILTDEDMTLRSMVPPMGEILNSLKPHSLSAADKIYLDWHL
LLEGPCNREICSTYASMVEEVKSCQLNSELQVSCQQTSALGFDFLEYFWKSVKHQDEDKQ
NNIYVPIPLPHDPPAVVETAQKYKQESDTGGHSHLEKSSSEKATSLFESMSQSSELNFYL
NVRSGTKRGTSAQNVSTLDIPTLNEEAVSFPSRPKVDKLIEIHPVSLSDSIRVLIKHIHT
SYTSALQESAYLRHTFSDGGLSISKQKLLGLITGGGSDGLDSHCKHEDKMELIVLYGLKQ
VAYYLCFFGLHAAHLYMNNLIGSFENIPERLKSSHCFISEALWKAETHQIDSHPSLHDIE
MILRSNMRISQKILVVADRAFWLPLGKKFTSMKMTFVELGKHPAASYLDPVNRRNPPPWV
LGGLPKSDCVLLDNKNIPDSFPFSEFGIILEYGGPNKSSTLLSLAPKLEGFPPLHFLCIK
VDVEDPSVALVEDNPTDQELKATLDTVLHALKKDLQEKMSKMRIVDSLNFVPATTQLQER
QENLCKHLTADSTKKKSADDQLLKLDYLEKKNIVNAHNFVPAAEERHIEEMLSKRTVLHS
RHFVPALAKSSSTSSVSANVIKAPQDNLSATDLPSSVKVGSIIPGRLSNPVIVVNTGSHG
KNMIFSRRPSYQQILSLEKGGMQVVERDVDLPMDLILGASVCLVWFETKIFESNEFTAPT
DTSSITNFVETIATNILMSISFCFCGCIMVFEGEPHSLSSVMESSDSLYAAAASLGMNLQ
LFFSHTPKSTDEIILSCIRNVNRLNKAPSPDIPESESLAESFLTKFPSINPLSAYIILSC
GGSLVEFLGWSHERRIQAVGKYLLSPQSISLFNALCKFGELGESKSVMTECSSVDSDICS
ALLQSPRKRKKCASQAFAVPNSDHFHPDPLNRLPGNHVEHNNVFSQPTFRRCSDVEDAMP
QLPEVFMFDRSLSRGGEGGSCLPREHDIDAIIGNQIMSDHFSNGLTTDMRHYDRRASSMV
DTYDFSWQPESVGKEPIKNSFTPSKPSFNRTYSHPVFPTALEINGDTGDWDIPGGTHHTW
KGGDIASTPFRNDMGSRYHEPREEIIQSPGSSLAFLNRDSGFHATSHGSGWEMDYLRQMN
EKRRARQERSRCNTPAMMSNSRTMDGASKILSPPPIDSFRYRGDRERDRSPSVGIQRYGK
AREGSKAHTHRARKDFKMQPSASHENRREPSIDPTWTPIDKRARQKLLFATHGKEKQSKL
IWRNQNSPGIGCGFRKRYREEEGM
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgcggactcgcttcctcgccgcggactacttctctccggcgccggcggcctcctgctcg
gacctagccctagcgtccctgcgcttccctcctcttcccgtcccctcccttcctcccgac
ccgcgtttcccgtttcccctccctttccccgccgcggccgacctccctgcagtcagcatc
tccggcgacggtctcgactctctccccatatcctccgcgctatccgagttcctcgcggcc
gtcattccgcagcccctgcctgtgccgactacccccgccgcctacgagggattggatgat
ttcctgtacgacaggggcgtgtatagcaagggttttagctcgagggagtctgttgcattg
aaaattcctgatggattggacgagattagccgcgagaaggaaggggagggagacggatcc
atatccatgtcagatagatcggggacctccactgatacaaagagatgggaactgctgaag
gagcacatatttgaggttgcagaggtcgatctcccgcaggttttggaaggtgcatccttt
ggtggtgaccagtcgggtgatggtgttaccttatcctttcatgttccagatgtgaaaatc
cacttggatttcattgatattgacaccgagatgacattgagatatccaactgaacttgcg
gaatcaatttatcaagtagagaaaattcctgtgaagcataatgatgaggaggaccttttg
tccggaagaactagtaacttctcagagattgcagcattagattgtggtgtagcaatacca
caactggaggttagtaggcattcttgggagcttaatgagtgtcccactaaggcagaggta
tccaatatttttcataaccttgtcgaacatttgggtgaagcacaagttcagcatccagtg
ttgaactcaactgagttgttgagatcaactgatatggacatgttggcctttgtttccaaa
gatgtcccatgtgcagactatcaagcagataaaccaatgacagtcaaggctgcagtacaa
atggatcttgtgaggatcaatgataatgttctacttgagagaaactcagcattataccct
ctcaagcctgatgggactttttcagacttgccttgctcagttcttttagaagaagtacag
atcactgattttccttcagagaatgtcttcagaatgcttgttcagtcagatgcagctgag
ctgaatacatctgatgaaatattcaaagacaacttttatcaagcaagacgtttctatgaa
tcagtggttagctctgagttggtgctggttgacgatacattcagatcactacctacacct
attttaactgatgaagatatgacactgaggtctatggtcccccccatgggagaaatactt
aactccctgaaaccacattctctctctgcagccgacaaaatttatttggactggcatctt
ttattggaaggtccatgcaaccgggagatctgttctacctatgccagcatggttgaggag
gtaaaaagctgccagttaaactctgagctgcaagtcagttgtcagcagacatcagccctt
ggctttgattttctcgagtatttttggaaaagtgtaaagcaccaagatgaggacaaacag
aacaatatttatgttcctatccctctacctcatgatccacctgctgtagtggaaacagct
cagaaatacaaacaagaaagtgatactggaggccacagccacttggaaaagtcgagttca
gaaaaggcaacttccttatttgagtcaatgtcacaatccagtgaactaaatttctacttg
aatgtcagaagcggcaccaagagaggaactagtgctcaaaatgtttctactttggatatc
cctactttaaatgaagaagcagtttcttttccaagcaggccaaaagttgacaagctcata
gaaattcatcctgtcagcctctcagattctattcgagtccttatcaaacacatccataca
agctatacttctgctttgcaagaaagtgcatatttgaggcatactttctcagatgggggt
ttaagcatttcaaagcagaaacttcttggactgataactggaggaggttcagatggcctt
gatagtcactgtaaacacgaagataagatggaactcattgtactctatggattaaaacag
gttgcatattatctatgtttctttggtttgcatgctgcccatctgtacatgaacaacctt
attggaagctttgaaaatattcctgagagattaaaaagtagtcattgtttcatcagcgaa
gcactgtggaaagctgagacgcatcagattgactctcacccatcattgcatgacattgag
atgatcctgagatctaatatgcgtatcagccaaaagatccttgtagttgccgatagagct
ttctggctgccattgggtaaaaaatttacttcgatgaagatgacatttgttgagctagga
aaacaccctgctgcatcttacttagatccggtgaacaggagaaatcctccaccttgggta
ctgggaggattaccaaaatcagactgcgttctgctagataataagaacattccagattca
ttccctttcagcgagtttggcatcatactggaatacggaggtccaaataaatcatctacc
ctgttgtctctggctcctaagttagagggttttccaccactacatttcctgtgtatcaaa
gtggatgttgaagacccttcggttgcacttgttgaggacaaccctacagaccaggagttg
aaagccacattggatacggttctgcatgcacttaagaaggatctgcaagagaagatgagc
aagatgcggattgttgattcattgaacttcgtaccagcaactactcaactgcaagaacgg
caggaaaatctgtgcaaacatctcactgctgattcaacaaaaaaaaaatctgcagatgat
caactgctcaaactagattatttggagaaaaagaatattgtcaatgcacataattttgtg
cctgcagctgaagagcggcacatagaggaaatgttgagcaaaagaactgttctccattca
agacattttgtgcctgcacttgcgaagagcagctcgacttcttctgtatctgcaaatgtg
ataaaagccccacaagacaatctatctgctactgacttgccttcaagtgtaaaagttggc
agcatcattccgggaagattatctaatcccgtgattgttgtaaatactggaagtcacgga
aagaatatgattttctctcggagaccgtcttatcagcagatactatctttggagaaagga
ggaatgcaggttgtggaacgagatgttgatcttcccatggacctaatacttggtgcttca
gtttgcttagtatggtttgagaccaaaatctttgagagcaatgaattcacagcgccaaca
gatacatctagtataacaaattttgtagagaccatcgcgaccaacattctgatgtcaatt
agtttctgtttctgtggttgcataatggtctttgaaggcgaacctcactccctttcttct
gtaatggagtcatctgattctctatatgctgcagctgctagtctgggcatgaacctgcag
ctattcttctcacacacacccaagtcaacagatgagataattctcagttgcattaggaat
gtgaataggttgaataaagctccttctccagatatacctgaatcagaaagcttggctgaa
tcatttctcacaaaattcccttcaatcaatcccttgtctgcatacattattctttcttgt
ggaggcagccttgtggagttcctcggctggtcacatgagcgccgtattcaggctgttggg
aagtacctgttgtctccgcagagcatttctctgttcaatgctttgtgcaaatttggtgag
ttaggtgaatctaagtctgtaatgaccgaatgctcatctgtagattcagacatctgtagt
gcattgttgcagtctccaaggaaaaggaaaaagtgtgcctcacaagcttttgcagtacca
aatagtgatcacttccatcccgatcctctaaaccgattgcctggtaaccatgtagaacat
aacaatgtattctcacagccgacattcaggaggtgctccgatgtggaggatgcaatgcct
cagctcccagaggtctttatgttcgatcgaagtttgagtaggggaggtgaagggggctct
tgtctaccaagagagcacgatattgatgcaataattggcaatcagatcatgagtgatcat
ttcagcaatggtttgactacagatatgaggcattatgaccgaagggctagcagtatggtc
gacacatatgacttctcttggcaacctgaatcagtgggtaaagaaccaatcaaaaactct
tttaccccaagcaaaccatcattcaatagaacttacagtcatccagtatttccaactgca
ttggagatcaatggtgatactggtgactgggacattccaggaggtacacatcacacgtgg
aagggtggggatattgcctcgacccctttcagaaatgatatgggcagcagatatcatgaa
ccaagagaggaaataattcagagtccaggaagttcgcttgcttttctgaaccgggattct
ggctttcatgcaacttcacacggctcaggctgggaaatggattatctaaggcaaatgaac
gaaaaaagaagagcacgtcaggagagatcaagatgtaatacaccagcaatgatgtcaaac
tcaaggacgatggatggtgcttccaagattctaagtcctccacctattgattccttcaga
taccgaggggatagagaaagggatcggagcccatctgttgggattcaacgttatgggaaa
gccagagaaggatctaaagcccatacccatagggcaaggaaagatttcaagatgcaacca
agtgcaagtcatgaaaacaggagggagccgtccattgatccaacatggactcccatcgac
aagagagcgagacagaaacttttatttgcaacgcacgggaaggaaaaacaaagcaagctg
atctggagaaatcaaaatagccctggcattgggtgtggcttccggaaaagataccgggaa
gaagaaggtatgtag
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integrated database retrieval system
