Triticum dicoccoides (wild emmer wheat): 119325312
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Entry
119325312 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119325312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119325312
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119325312
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
HECT type E3
119325312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_2
Motif
Other DBs
NCBI-GeneID:
119325312
NCBI-ProteinID:
XP_037454957
LinkDB
All DBs
Position
6B:4769879..4779917
Genome browser
AA seq
1843 aa
AA seq
DB search
METRSRKRAAASTSSPASSSKRARTAPAGRPGPPAMDPSPSSRRRARAAAAAAAAAAEKG
KDLDPSSTSNPAPPHHHHHEEDDDEEDDDSAAAPFPPSFTSASTALQGLLRRLGAGLDDL
LPGSAAAAAASSTTSAQLKRILAGLQAEGDESRQLGSLMQLCEMLSIGTEDSLAAFPVDA
FVPLLVGLLREEDGPGASPEVMLLAARALANLVDVLPSACSSVVHYGAIPCFCARLLTIE
YMDLAEQSLQALRKISLEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANICRKLPS
DASEFVMEAVPLLTNLLHHHDSKVLEHASVCLTRIAEAFAHHPEKLDELCNHGLVAQAAN
LVSISNSPGQTSLSTSTYTGLIRLLSTCASGSLLAAKTLLLLGISGTIKEILSGSGLVAG
TSVAPALSRPADQMFEIVSLADDLLPHLPAGIISLPTNCRVFIKGSSTRRPAPMKQDGAV
STENERSGHESLLQEHPELLQQFGMDLLPVMTQVYGSSVNAPIRHKCLSIIGKLMCYSSA
EMIQTLLSTTNISSFLAGILAWKDPQVLIPALQIAEIMMEKLPETFSKLFVREGVVHAVE
ALICPESSNMVPPQVPPQDKDGDSVMSSRPRRQRRRGGAAPTENSLLDVSNVSNSGIASA
SPCSTEVPVTSLRFEVSDRAKSFKDKYFPSDHGSSDAGVTDDLLKLRALCAKLNTATENV
VTKAKGKSKALSPSHFDISHDVEEQLDLIVNEMLAELSKANGVSTFEFIRSGVITSFLDY
LSCGTFGKEKVSEANLPKLRQQALRRYKSFISVALSVDHERSETPMTLLVQKLQSALCSL
ERFPVVLSQSNRIGTGGSRLTSGLGALAQPFKLRLCRAQGEKSLRDYSSNIVLIDPFASL
AAVEDFLWPRVQRGEAASKSQAASANNSESGTPGAPAGASSTPASARRPTTRSKSSAASA
GTSNKESLEESSSSAKAKGKAIVKPSSAEPKGPNTRNASRRKSASEKDLDMKQTHGDSSS
EDEELDTSHIELDDALMIDDDDISEDEDDDHEVLQEGSLPICVQDGVHDVKLGDADDSNV
GSASDSQAQPSSGSGSGSSARNMMGRGVNAAEFRSAGAFGSQGAMSFVAATMAGLTSGGG
RGVRGGRDRRGLSLGGSMSEHNKLIFMAGGKQLSKNLTVYQAIQRQLMLDEDDEERFNGS
DLPNDGNRFWGDVFTITYQKADSQAEKGSQGSSASLHQKSESCRSVSEAHKVSLLDSILQ
GELPCDLEKTNSTYSILALLRVLEGLNQLSPRLRAQAASDDFAEGKIATLDELSETGTKV
PSEEFVNSKLTPKLTRQMQDVLALCSGSLPSWCNQITKACPFLFPFETRRQYFHSTAFGL
SRALNRLQQQQGDNPNTGSEREVRFGRLQRQKVRVSRNRILDSAAKVMEMFSSQRAVLEV
EYFGEVGTGLGPTLEFYTLLGHELQSARLGLWRSSLPYDYSEMEIDKNGVIHVDSDDDLP
APQELNSSEDARNLVQAPLGLFPRPWPSNVDTSEGSRFFKVVEYFRLVGRVVAKVLQDGR
LLDLPLSTAFYKLILGQELDLFDIISFDAELGKTLQELQVLVERKRFLESACGKDQLEVA
DLHFRGAPIEDLCLDFTLPGFPDYILKEGEQNTIVNIHNLEEYVSLVVDATVKSGIMKQV
EAFRSGFSQVFDISSLQIFSPQELDYLICGRQEIWEAESLVDNIKFDHGFTAKSPAIINL
LEIMAEFTPDQQHAFCQFVTGASRLPTGGLAALSPKLTIVRKHPSSGVSTLNTSGVTDAA
DDDLPSVMTCANYLKLPPYSTKEVMRKKLLYAILEGRGSFDLS
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcgcagccgcaagcgcgccgccgccagcacctcctccccggcctcctcctcc
aagcgcgcccgcaccgcccccgccggccgccccggaccgcccgcgatggacccgtccccg
tcctcccgccgccgggcgcgggccgcggcggcggccgcggccgccgcagcggaaaaaggc
aaggacttggacccctcctccacctcgaaccccgccccgccgcaccaccaccaccacgag
gaagacgacgacgaggaggacgacgactctgccgccgcccccttcccgccctccttcacc
tccgccagcaccgcgctccagggcctcctccgcaggctcggcgccgggctcgacgacctg
ctcccgggctccgccgcggcggccgcggcctcctccaccacctccgcgcagctcaagcgg
atcctggccgggctgcaggccgagggggacgagtcgcgccagctcggctccctcatgcag
ctctgcgagatgctctccatcggcaccgaggactcgctcgccgccttccccgtcgacgcc
ttcgtgccgctcctcgtcggcctgctccgcgaggaggacggccccggcgccagccccgag
gtcatgctgctcgccgcgcgcgccctcgccaacctcgtcgacgtgctgccgtccgcctgc
tcctccgtcgtgcactacggggcgataccgtgcttctgcgcccggctcctcaccatcgag
tacatggacctcgccgagcagtctctgcaagctctgaggaagatttcactggagcatccg
accgcctgtctgagagctggtgcactaatggccgtcctgtcgtatctggacttcttctcc
actggtgttcagagagttgcattgtctactgctgccaatatttgcagaaagctaccctct
gatgcatccgagttcgtcatggaagcggtaccgttgctcactaatctcctacaccaccat
gactctaaggtgctagagcatgcttctgtttgtttaacacgcattgcagaggcctttgct
caccatccagaaaagttggatgagctgtgcaatcatggcttggttgcacaagccgctaac
ttggtatccatcagcaactccccaggccagacatcactgagtacatcgacatatacgggt
ttaatccgtcttctctcaacatgcgcgagtggatcgctgttggcagccaaaacacttctt
cttcttggcattagtggcaccattaaagaaattctttcagggtctgggttggttgctgga
acatccgtcgccccagctttgtcaaggcctgctgatcagatgtttgagatcgtgagcctt
gctgatgatttgctcccacatttgcctgcggggataatttctttaccaacaaactgtcgt
gtatttattaaaggctcttccacaaggagacctgctcccatgaaacaagatggggctgtt
tcaacagaaaatgagaggtcaggccatgagagtctattacaggagcaccccgaacttcta
cagcagttcggtatggacttattgcccgtaatgacacaggtgtacggttcaagtgtaaat
gcaccaatacgccataagtgcttatctatcattgggaaattaatgtgctatagctctgct
gaaatgatccagaccctccttagcacgacaaacatatccagcttcttagcaggcattctt
gcttggaaagatccacaagtgctgattcctgctcttcagatagcagaaattatgatggag
aaactacccgagacattttccaagttatttgtgagggaaggtgttgttcatgctgtggaa
gcacttatatgcccagaatcctcaaatatggtgcctcctcaggtaccaccacaggataag
gatggtgattctgttatgtcctcacgccctagacgacaacgtcgtcgtgggggtgctgca
cctacagaaaacagtttgttagatgtatcaaacgtttccaattctggcattgccagtgca
tcgccatgctctacagaagttccagtcaccagcctccgttttgaagttagcgaccgtgcg
aagtcgttcaaagataaatacttcccttcagaccatggttccagcgatgctggagtcact
gatgaccttcttaaactgagagcactgtgtgcaaagttgaatactgcaactgaaaatgtc
gtaacaaaagccaaagggaaatcaaaagccctgagccctagccattttgacatctcacat
gatgtggaggaacagttagacctgatagtaaatgaaatgcttgctgagctaagcaaagct
aatggtgtctccacatttgagttcatcaggagcggagtcatcacatcatttctcgactat
ttgtcatgtgggacattcgggaaggaaaaggtatccgaagcaaacctgccaaagcttcgc
caacaggcgcttaggcgatacaagtccttcatatctgttgccctttctgttgaccatgaa
aggagtgaaactccaatgactcttttggtccaaaaactgcaaagcgcattatgttcattg
gaacgtttccctgttgtgctcagccagtctaacagaattggtactggaggctcccgtctt
acctcaggtcttggtgctctagctcaacccttcaagttgcgcctgtgtcgagctcaaggc
gaaaaatcacttcgggattattcatcaaatattgtacttatcgatccctttgcgagtctg
gcagctgttgaagattttctttggcccagagttcagcgcggtgaggctgcttccaaatct
caagccgcttctgcaaataattctgaatctggcacacctggtgcccctgctggtgcatca
tcaacacctgcatcagcccgccgtccaacaacaagatcaaagtcatctgctgcaagtgct
ggtacatctaataaggagtctctagaggaaagcagtagtagtgcaaaggctaaaggcaaa
gccattgtaaaaccaagctcagctgaaccgaaaggaccgaacacaaggaatgctagccgc
agaaaatctgcctcagagaaagatttggacatgaagcagacacatggcgacagtagttct
gaggatgaggagctggacacatctcatattgagcttgatgacgctttaatgatcgatgat
gatgacatttcagaggatgaagatgatgatcatgaggttctgcaagagggctctcttcct
atttgtgttcaagatggcgtgcatgatgtgaaattgggtgacgctgatgactctaatgtt
ggttcagcaagtgatagccaggcgcagccatcatctggttctggttctggttccagtgct
agaaacatgatgggcaggggagtaaatgctgctgaatttcgaagtgcaggtgcctttgga
tcgcaaggtgcaatgtcatttgttgctgcgacaatggctgggctgacttctggtggtggt
cgcggtgttagaggtggtcgtgatcggcgtggcctgtcacttgggggtagcatgagtgag
cacaacaaactgatattcatggctggtgggaagcagcttagcaaaaatttgaccgtatat
caagcaatccaacgtcaactgatgctcgatgaggatgatgaagaaaggttcaacgggtct
gacttaccaaacgatggaaaccgattctggggtgatgtgttcacgataacttaccagaag
gctgatagccaggctgagaagggatcccaaggtagttctgcctcgttgcatcaaaaatct
gaatcttgcagatctgtttctgaagcacacaaggtttctcttcttgatagcatcttacaa
ggggaacttccatgtgatttggagaaaacaaactcaacctacagcattttagcgttgtta
cgtgtattagaagggctgaatcagctatcccctcgtttaagagcacaggcagcatctgat
gatttcgctgaggggaaaatcgctacgctggatgagttatctgaaactggaaccaaggtg
ccttcagaagagttcgtcaacagtaagttgaccccgaagcttactcggcaaatgcaggat
gttcttgcactctgcagcggcagtttaccttcttggtgtaatcagatcacgaaagcctgc
ccctttctgttccccttcgaaacgaggaggcagtacttccactccacagcttttgggctg
tcccgagcgttgaatcgacttcagcagcagcagggtgataaccccaacactggtagcgaa
agagaggtccggtttggcaggttacaacgccagaaagttcgtgtttcccgtaaccgtatt
ctggattctgccgctaaagtcatggagatgttctctagtcagagagctgttcttgaggtg
gaatactttggtgaggttgggacagggctgggtcctactttggagttctatactctcctg
ggccatgaactgcagagtgctcggttgggattgtggagatctagtttgccttatgattat
tcagaaatggaaatcgacaagaatggtgtgatccatgtggattctgacgatgatttgcca
gctccgcaagaactcaactcatccgaagatgcccggaatctggtacaagcccctcttgga
ttgtttcctcgcccttggccttcaaatgttgatacctcagagggtagcagattcttcaaa
gttgtcgaatattttcgcttggtcggtcgagttgtggcgaaagtcttgcaggatggaagg
cttttggatttgcctttgtcaacagcattttataagctcatactcggacaggagcttgat
ttattcgacattatctcgtttgatgctgagcttggaaagacactgcaagaactgcaagtt
cttgttgagcgtaagaggttccttgagtccgcttgtggcaaggatcagctagaagttgca
gacttgcatttccgtggagctcctatcgaggacttgtgtttagattttactcttccaggt
tttcctgattatattctcaaagaaggcgagcaaaacacaattgttaatatccacaaccta
gaggagtatgtttctttggtagtagatgcgacagtgaagtcagggattatgaagcaggtt
gaagctttcagatcaggttttagtcaggtctttgatatctcatccctccaaatattttca
cctcaagagcttgactatctaatatgcggtcgtcaagaaatatgggaggctgaatcactg
gtggataacataaaatttgatcatgggtttactgctaaaagtcctgccattataaatcta
ctcgagatcatggcggaatttacccctgatcagcagcatgcattctgccagtttgtaact
ggcgcttctcggcttccaactggtggtttggctgcccttagtcccaagcttaccatagtt
cgaaagcacccctcgagtggggtgagtactttgaatacaagcggggtgacagacgctgcg
gatgacgatttgcccagtgtcatgacatgcgccaattatctcaaactacccccatattcc
acaaaagaagtcatgcgcaagaagctgctctacgccatcctagaaggccgtggatctttt
gatctatcctga
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integrated database retrieval system
