Triticum dicoccoides (wild emmer wheat): 119325727
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Entry
119325727 CDS
T07278
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119325727
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119325727
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
Helicases
119325727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DHX37_C
DEAD
HA2_N
AAA_22
ATPase
nSTAND3
PhoH
Motif
Other DBs
NCBI-GeneID:
119325727
NCBI-ProteinID:
XP_037455352
LinkDB
All DBs
Position
6B:277459440..277465834
Genome browser
AA seq
1286 aa
AA seq
DB search
MEDDSNALILPCKRKNKVQGIGKDGKKSKSKEDPKMSKTQLKKMQKLEEEKQKKALQAKS
IEFLQKHMIADDVFSLLDTTCSIGKAATMKEKFRRAAQFSKHGLDVPEELSLFKKNCGRK
GVPGDNEAVPEVSPVKFIKAAKLDHPGSERKNHEKDSMKPMMDLGVSILEQKTEGTNDDA
GISVRQIILGQKTEETNDDADILAHQPIQSSVQNCSAAEIDLQDKELQQSETALQECFNP
PIVVPVSRPQEVEKARRDLPIIMMEQEIMEAIYENSVVILCGETGCGKTTQVPQFLYEAG
FGTSNRAGRKGMIGITQPRRVAVLATSKRVSYELGLKLGKEVGFQVRHDKEVGSKCSIKF
MTDGILLREIQSDILLKHYSVIILDEAHERSLNTDILIGMLCRITKLRKDTYADQQKKIR
SGKNIKPEDMISQLKVVLMSATLQLKEFISNRRLFDVIPPTVEVPARQFPVTIHFTKRTH
DDYLAQAYKKVLSIHKSLPPGGILVFVTGQREVDYLCKKLQRASKRQIGKKPERVGDECG
SRPEIDEKEIFEAYDIDRTEAEHQEDMFSSYGQDEMDDGLNVDSSDAETESETDTDSDED
SAAHQTTEDGPVLSFLKHAESLSVLKASFKGISGISGESEAAEESSNVTIAEKSNPFNPS
FSKRTEPTSVSHRRLRVLPLYAMQPASQQLRVFRDIPEGERLVVVATNVAETSLTIPGIT
YVVDTGKEKVKNYDHATGMASYEVQWISKASASQRAGRAGRTGPGHCYRLYSGAAYGKDG
LFPEFSEPEIKKMPVDSLVLMLKFMKIDKVENFPFPTPPNDESLVEAKRCLKTLEALDSK
EKLTSMGKAMAQYPMSPRHSRLLLTIIKILKSQQGYARSNFILGYATAAASALSYANPFL
IQVDTSRESNQDGPDPERKDQDERKRQKKLKAMVREARKDFSIPSSDALTISHALRSFEC
SRNPVEFCREYSLHLKTMEEMSKLRKQLLRLIFHNSKFCDEFAWNYGGSEDVEQAWRSET
DKKPMLNEEELLGQGICAGWADRVAKKINTFSGLSKEDRKVRAGRYQSCILDDTIYLHRS
SSVAQTPPEFVVYSELLNTKRSYMHGVTSVKPGWLFKYASSLCTFSAPLEDPKPYYEPQN
DQVYCYVSPIFSRHNWQLPLHSLPIEDPTRRLQVFAWALLKGDVLPCLRMVQKFLALSPS
AVLGPASQRRVGDLLNRMKIGGKLKDSRRALRDAWSSDPDFLYPEIQAWIQDKYQSQFEA
IWEQMHQEVRLEGHQLFPKRFKKVEG
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgatagcaacgcgcttattcttccctgcaagaggaagaacaaagtacaaggg
ataggcaaggatggcaagaaaagcaagagcaaggaagacccaaagatgagcaagactcag
ctaaaaaaaatgcagaaattggaggaggaaaagcaaaagaaggcactgcaagcaaaaagc
atcgaatttttgcagaagcacatgattgctgatgatgtattttcactgctggatactacg
tgctctattggaaaagctgcgactatgaaagaaaaatttaggcgtgccgcgcagttctcc
aagcatggtttagatgttcctgaagaactttcactattcaagaaaaactgtggtcggaaa
ggagttcctggagacaatgaagctgtgccagaagtttccccggtgaagtttattaaggca
gcaaaacttgatcatcctggcagtgaacgaaagaatcatgagaaagattcgatgaaacct
atgatggatcttggcgtgagcattctggaacaaaaaactgaagggactaatgacgatgct
ggcatttcggtacgccagatcattctgggacaaaaaactgaggagactaatgatgatgct
gacattttggcacatcagccgattcagtcatccgtgcaaaattgctctgccgctgagata
gatttgcaggataaagagctacaacaaagtgaaactgctttacaagaatgcttcaatcct
ccaattgtggtgcctgtctcaagaccacaggaggttgagaaggcgaggagggatctccca
ataataatgatggagcaggaaataatggaagctatctacgaaaattctgtggtaattcta
tgtggagaaacaggctgtggtaaaactactcaggtccctcagttcttatatgaagccggc
tttggcacaagcaatcgagctggtagaaaagggatgattggtatcacccaaccacgacgt
gttgctgttcttgccacatccaagagggtgtcttatgagttaggacttaagctaggaaag
gaggtcggttttcaagttaggcatgataaagaagttggaagtaaatgctccatcaagttt
atgacagatggcattttgctgcgagagatccagagtgacattctgttgaagcactattcc
gtgatcatcttggatgaggcacatgaaaggagtttgaacacagatatacttattgggatg
ctttgtagaattacaaagcttcgcaaggatacatacgcagatcaacagaaaaaaatacgc
tctggaaagaacattaagccagaagatatgattagtcagctgaaagtggtgctgatgagt
gctaccttgcagttaaaggaatttatttcaaacagaagattgtttgatgtgattccacca
actgtagaggtacctgcacggcaatttccagtaacaattcacttcacgaagaggacacat
gatgattatttagcacaggcttataaaaaggttctgtcaatccacaagagtctaccacca
ggtggaatccttgtatttgttactggacaacgagaagttgattatttatgtaagaaactg
caaagagcatccaaacggcaaattggtaagaagcctgaaagggttggagatgagtgtggt
tcaagaccagaaatagatgagaaggaaatttttgaagcatatgatattgatagaactgaa
gctgagcaccaagaggacatgttttcctcatatggtcaagatgaaatggatgatggacta
aatgttgattcttctgatgctgaaacagagagtgagactgatactgacagcgatgaggat
tccgctgcacatcaaaccacagaagatggaccagtgttatcatttttgaaacatgctgag
agtttatctgtactgaaggcatcctttaaaggtatatcagggatatcaggagaatcggaa
gctgctgaggaatcgagcaatgtgacaattgcggaaaagtcaaacccttttaatccttct
ttcagtaaacgtacagaacctacatctgtttcacaccgtaggcttcgtgttttaccactt
tatgcaatgcaaccagcttcgcagcagcttagagtgttccgtgatattcctgaaggggaa
agattagttgttgtggcaactaatgttgcagaaacctctttaacaattcctggtataaca
tatgtggtcgatactggaaaagaaaaggttaagaactatgatcatgctacggggatggca
agttatgaagtccagtggataagcaaggcgtcagcatcccaacgtgctgggagagctgga
agaactgggcctgggcactgttaccgtctctactcaggtgcagcatatggtaaagatggt
ttatttcctgagttctctgagccagagatcaagaaaatgccagttgatagccttgtgctt
atgctcaagtttatgaaaattgataaggttgaaaactttcctttccctacgcctcctaac
gatgaaagtttggttgaagctaagcgttgcttgaagacattagaagcacttgacagcaaa
gaaaaacttacatcaatgggaaaggctatggcgcaataccccatgagcccacgacattcg
cgtcttcttctgacaataattaaaattttgaagagccagcaaggctatgccagatctaac
ttcatactgggatatgcaactgctgctgcatcagctttgagttatgcaaatccttttctc
attcaggtagacactagtagagaatcaaaccaggatggccctgatccagaacgtaaggat
caagatgaaagaaagagacagaagaagctcaaggccatggttcgagaggcacgcaaagat
ttttccatccctagtagtgatgctttaaccatttcccatgctttgcggtcatttgagtgt
tcaaggaacccagtggaattctgcagagaatactcacttcacctcaaaacaatggaagag
atgtcaaaattgagaaagcagcttcttcgattaatatttcacaatagcaaattttgtgat
gaatttgcttggaattatggaggttctgaggatgttgaacaggcctggaggagtgaaacc
gacaaaaaaccaatgctgaatgaagaggaacttctggggcaaggaatatgtgctgggtgg
gccgatagggttgcaaagaagattaacactttttctggattgtcgaaagaggaccgaaag
gttcgagctggacgttatcaatcttgcatcctcgatgatacaatatatctccaccgatca
tcttctgttgcccaaactccaccagagtttgtagtttactcggaactactaaatacaaag
agatcgtacatgcatggtgtgaccagtgtaaagcctggatggcttttcaaatatgctagt
tctctctgcaccttctcagcgccactggaagatccaaaaccctattacgagcctcagaat
gaccaggtgtactgttatgttagtcccatcttttctagacataattggcagcttccgctg
cacagtttacccatcgaagaccccaccaggcggttgcaggtatttgcatgggctttgctg
aaaggggatgtcttgccatgtctaaggatggttcaaaagttcctggctctgtcaccatct
gctgtccttgggcctgccagccaaagaagagttggagatcttcttaacaggatgaagatt
ggtggaaaattaaaagacagccggagagcattaagagatgcatggagtagtgatccagat
tttctttatcctgagattcaggcatggatacaggataaatatcagagccagtttgaagca
atatgggaacaaatgcaccaagaagttcggcttgagggacaccaacttttcccaaagagg
ttcaagaaagttgaggggtag
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