Triticum dicoccoides (wild emmer wheat): 119325792
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Entry
119325792 CDS
T07278
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119325792
Enzymes [BR:
tdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
119325792
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Other ribosome biogenesis factors
119325792
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Ubie_methyltran
PCMT
FtsJ
Methyltransf_31
RsmF-B_ferredox
Methyltransf_4
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
119325792
NCBI-ProteinID:
XP_037455417
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Position
6B:complement(295595800..295601930)
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AA seq
506 aa
AA seq
DB search
MPPPPKNRSHAPAKAGQSRPPPRQPGRWMASRDAGERAAFFARREAATVLRRVLRGDASK
RSGGSIKSLVFSPSVRNKRATFALVCQTLKYLPILKEVLASSGVFSSKWKKQEELVYVTA
YDILFGQEIAVSGSVEEYIMLHKDTFRTALQKICVKRKVSNVEDLLSEKTTVKPKPRFVR
VNTLKTTTGSVIEVLSKMHKVDKDDMVPDMLVLPPGTDMHKHPLVTDGKVFLQGKASCMV
AAAVSPKPGWKVIDACAAPGNKTVHLAALMNGEGSIIACELNKERAKTLQHTVRRSGANN
IETVIGDFLNIDSNDPSYAEVRAILLDPSCSGSGISTERLDHLLPSHSIDDQDDAGSSAR
IRKLSAFQRKALSHALSFPSVERLVYSTCSIHQAENEDVVSSVLPLASSLGFELATPFPQ
WRRRGLPVFYGAEHLLRTDPEDDLEGFFIALFLRKAAAADALEPSEDGGALGRKRKRACT
TRSGGLRAFSSLRLSRMDVLCSIWGI
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcctaagaatcgcagccacgctcccgcgaaggccgggcagagccggccg
ccgccacgccagccggggcggtggatggcgagccgcgacgctggggagcgagcggccttc
ttcgcgcggcgcgaggcggccacggtgctccggcgcgtgctacgcggggacgcctccaag
cgctccgggggatccatcaagtccctcgtcttctcaccctccgtacgcaacaagcgcgcc
accttcgccctcgtctgtcagaccctcaagtatcttccaattcttaaggaggttttagca
tcaagtggagtattcagcagcaaatggaagaaacaagaggaattagtttatgtgacggcc
tacgacatcctcttcggtcaggaaattgcagtttctggatctgtcgaggagtatattatg
ctacataaagatacttttaggactgctcttcagaaaatatgtgttaaaaggaaagtcagt
aatgttgaggatttgttaagcgagaaaactacagtcaaaccgaagcccaggtttgttcgt
gtaaacacactcaagaccacaacaggatcggttattgaagtactaagtaaaatgcacaag
gttgataaagatgatatggttccagacatgttggtgctgcctcctggaactgatatgcat
aaacatccattggtcacagatggaaaggtgtttttgcagggaaaagcaagttgtatggtg
gcagctgcagtgagccctaagccgggttggaaggttattgatgcatgtgcggctccaggg
aacaaaacagtccatcttgctgcactcatgaatggagaagggagtattattgcttgtgaa
cttaacaaagagagggccaagacattgcaacatactgtcagaagatctggagcaaacaat
attgaaacagttattggtgactttttgaatatagatagcaatgatccgtcatatgcagag
gttcgtgctattctgttagacccctcttgctctggatctggaatctctaccgagagactc
gaccacttgcttccttcacattctatagatgatcaggatgatgcaggttcaagcgcaagg
atccggaaactgtccgcctttcagcggaaagctctctcacatgctctatcatttccctct
gtagagagattggtctacagcacctgttcaatacaccaggcagagaatgaggatgtcgtc
agctctgtgctacctttagcctcatcactcggtttcgagctcgctaccccattccctcaa
tggaggcgccgtggccttccggtcttctacggagccgagcatttgcttcggacagacccc
gaggatgacctggagggattcttcatagcgctgtttctgaggaaagcagccgccgctgat
gctttggagcctagcgaagacggtggcgcgttgggaaggaaaaggaaacgagcttgcaca
acgcgaagcggaggtctcagggcgttcagctccttgagattgtccaggatggacgtgctc
tgctccatctggggtatatag
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