Triticum dicoccoides (wild emmer wheat): 119326103
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Entry
119326103 CDS
T07278
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
119326103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119326103
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119326103
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
LRR_4
F-box_5
F-box-like
LRR_8
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
119326103
NCBI-ProteinID:
XP_037455706
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Position
1B:complement(168534269..168539338)
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AA seq
589 aa
AA seq
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MGRGGARDGAGHAAPPWHLLPDEVLEHAFSFLPAAADRGAAAAVCHGWLGAERRSRRRLA
VANCYAAAPRDAVDRFPSVRAAEVKGKPHFADFGLVPPAWGAEAAPWVAAAADGWPLLEE
LSFKRMVVTDECLEMIASSFKNFQVLRLVSCEGFSTAGLAAITEGCRNLRELDLQENYIE
DCSSHWLSYFPESFTCLETLNFSCLEGEVNFTVLERLVSRCRNLKTLKLNNAIPLDKVAS
LLRKAPQLVELGTGKFSAEYHSDLFAKLEAAFAGCKSLRRLSGAWDAVPDYLPAFYCVCE
GLTSLNLSYATVRGPELIKFISRCKNLQQLWVMDLIEDHGLAVVAGSCSKLQELRVFPSD
PFGAGQVLLTERGLVDVSASCPMLESVLYFCGQMTNEALITIAKNRPNFTCFRLCILEPR
TPDYVTRQSLDAGFSAIVESCKGLRRLSVSGLLTDLVFKSIGANGNCLEMLSIAFAGNSD
LGLHYILSGCKSLKKLEIRDCPFGNKPLLANAAKLETMRSLWMSSCSLTLGACRQLAEKM
PRLTVEIMNDPGRTCPVESLPDDSPVETLYVYRTIAGPRSDTPDYVQIV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggcggcgcgcgcgacggcgccggccacgctgcgcccccatggcacttgctc
ccggacgaggtcctggagcacgccttctccttcctccccgccgccgccgaccgcggcgcc
gcggcggccgtctgccacggctggctcggggccgagcgccgctcccggcgccgcctcgcc
gtcgccaactgctacgccgccgccccgcgcgacgccgtcgaccgcttcccctccgtccgc
gccgccgaggtcaaggggaagccccacttcgcggacttcgggctggtcccgcccgcctgg
ggcgccgaggccgcgccctgggtcgccgccgccgccgacggctggccgctgctcgaggag
ctcagcttcaagcgcatggtcgtcacggacgagtgcctggagatgatcgcctcctccttc
aagaacttccaggtcctgcgcctcgtctcatgcgagggattcagcaccgccggcctcgcc
gccattacagaaggttgcagaaatttaagagaacttgacctgcaagagaactacattgag
gattgttccagtcattggctcagttactttccagaatcctttacttgtctggaaactctg
aacttttcatgcttagaaggggaggtcaatttcactgtacttgagcggctagtgagcaga
tgccgcaacctcaagactctgaagctcaacaatgctatccctcttgacaaggttgctagc
cttcttcgtaaggctccgcaactagtagaactcggaactggcaaattttccgctgagtat
cattcagatctctttgcaaagcttgaagcggcatttgcaggttgtaaaagcctgagaagg
ctctctggggcttgggatgctgttccagattacctgccagcattctactgtgtatgtgaa
ggcctgacatcacttaatctgagttatgctactgtgcgaggccccgagctaataaaattt
attagcagatgcaagaatctgcagcaattatgggtgatggacctaattgaggaccatggt
ctagctgttgtggcaggctcttgcagtaaactgcaagagctgcgggtcttcccgtctgac
ccttttggtgccgggcaagttttattgactgaaagaggccttgttgatgtttctgccagt
tgccccatgttggagtcagttctctacttctgcggccagatgacgaatgaggccctcatt
acaattgcaaagaaccgtcccaacttcacttgcttccggttatgcatccttgagccccgt
actccagattacgtcacacggcagtctcttgatgctggcttcagtgccattgtggaatca
tgcaagggccttaggcgcctctctgtgtctggccttctcacagatctcgtgttcaaatca
atcggtgcaaatggtaattgtcttgagatgctgtcaatcgcctttgctgggaacagtgat
cttggcctgcattatatcctctctggctgcaagagcctgaagaagctggaaatcagggac
tgcccatttggaaataagccgttgctggcaaatgctgccaagctggagacaatgcgatcc
ctttggatgtcgtcgtgctcattgaccctgggcgcatgccgacagcttgcagagaagatg
ccccgccttaccgtggagataatgaacgatcctggacgaacatgccctgtggagtcactt
ccggatgatagcccagtcgagacattgtatgtgtaccggacaattgccggtccaaggtcc
gacacaccagattacgtccagattgtttaa
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