Triticum dicoccoides (wild emmer wheat): 119328600
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Entry
119328600 CDS
T07278
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119328600
04120 Ubiquitin mediated proteolysis
119328600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119328600
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119328600
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119328600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_11
zf-RING_16
zf-RING_5
zf-RING_Vps41
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119328600
NCBI-ProteinID:
XP_037457485
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All DBs
Position
7A:complement(199036402..199041939)
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AA seq
491 aa
AA seq
DB search
MIRLQTYAVFSLLATITSVYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL
VKRVFLGTLREAEVERLNEQSWREVVEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA
QKRVEYIETTPSVPMLSHIRIVSFMLFLLVVDCLFLANSLGSLIQKREASVAIFFSFEYM
ILATSTVSTFVKYVFYVSDMLAEGQWENKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG
VPLHLIRELYETFRNFRIRISDYIRYRKVTSNMNERFPDATPDELDAGDVTCIICREEMT
TAKKLLCGHLFHVHCLRSWLQRQHTCPTCRAPIIPPDNGRAASAQQHGAQPGVQPGTGTP
SSGGAPTENVNMRQAKLEAAASAASLYGRSFAYPPVNTLNRNSGPLHATPSTSQPGEAST
STSHPLEPQPSYSRGPVSSTTGSGDPGNSLQKAYEKAIRSQIEVLQIQLQMMQQGATASP
TSNENAEQAGK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgatccggttgcagacgtacgcggtgttcagcctgctggcgacgataacgtcggtgtac
tatgcgttcagcagcagggagcagttctacccggccatggtctacctctccacgtccaag
atatgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgtcgcctggcagctc
gtgaagcgcgtcttcctggggacgctccgggaggccgaggtcgagcggctcaacgagcag
tcgtggcgtgaggtcgtggagatcctcttcgcggtcaccatcttccgccaggatttctcc
gtctctttcctcgccatggtcgccgccctgctcctcgtcaaggctctgcactggcttgcg
cagaagagggtcgagtacattgagaccacaccctccgtgccaatgctgtcgcacataagg
atcgtgtccttcatgctattccttcttgtcgtcgactgcctcttcctggcgaactcgctg
ggctcactgatacagaagcgggaggcatctgtggccatcttcttttcttttgagtatatg
atactggcaacatcgacagtgtcgacattcgtgaagtatgtattctatgtcagcgacatg
ctagcggaaggtcaatgggagaataaagcagtgtatacattttatttggagcttatcagt
gaccttgtgcacttgtctttatatatgctattcttcatagcgatcttcctgaactatggt
gtcccattgcacttgattcgtgagctgtatgagaccttccgcaacttcagaattcgcatt
tcagattatatacgctacagaaaggtgacttccaacatgaatgaacgctttccagatgcc
acaccagatgagcttgatgcgggtgatgtcacatgtattatttgccgtgaagagatgacc
acagcaaagaagctgctttgtgggcacttgttccatgtacattgtttgaggtcatggtta
cagcgccaacatacttgcccaacatgtagagctccaattatccccccagataatggacgt
gcagcatcagcacagcagcatggagctcaacctggagttcagcctggcaccggtactcca
agttcaggaggagcaccaactgagaacgtgaacatgcgtcaagcaaaacttgaggctgct
gcttcagctgcttctttatatgggagatcatttgcttatcctccagtgaacactttgaat
aggaactcaggacctctgcacgctacaccaagtacttcacaaccaggagaagcaagtact
tccaccagccatccattagaacctcagccttcttattcacgtggtccagttagttcaaca
actggtagcggggaccctggaaattcactacagaaggcatatgaaaaggctataaggagc
cagatagaggtgttgcaaatccaattgcaaatgatgcagcaaggggccaccgcatcgcca
actagcaatgagaacgctgagcaagccggaaaataa
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