Triticum dicoccoides (wild emmer wheat): 119328850
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Entry
119328850 CDS
T07278
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119328850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119328850
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119328850
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
119328850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
PAP_central
Motif
Other DBs
NCBI-GeneID:
119328850
NCBI-ProteinID:
XP_037457740
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Position
7A:complement(716668766..716674915)
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AA seq
1099 aa
AA seq
DB search
MAEIVDPAAAAAGGEPEEQEEARSLSTAAAAAAAADDDEDDEEEGDVCRICRNRGDDEHP
LRYPCACSGSIKFVHQDCLLQWLDHSNSRQCEVCKHAFSFSPVYAQNAPTRLPFQELVFG
VGMKACHVFQFVLRLAFVLSVWLMIIPFITYWIWRLTFVRSLGEAQRLFLSHISAQLILS
DCLHGFLLSAIIVLIFLGATSLRDYIRHLRELGGHEADRDDAGRERHGARAVRRLAGPNN
RVPGADGNIDDLAEAQGLGAGELLRRNAENVAARLERLEAQVEQMLDGLDDADGAEDVPF
DELVGMQGPVFHLVENAITVLASNAIFLIVVIFVPFSLGRIVLYYLSWFFSSASSPMLAR
VMPFTESAISLANETLNSAFNAMKNFSSDSHNEGVIGHVIEVVTQSLKINATGLAVMQGT
GKSSLVKGTAIGSSYLSDLTTLAVGYMFIFCLVFLYIGSLALLRYARGERFTIGRLYGIA
AILEAIPSLCRQFFSGMKHLMTMVKVAFLLVIELGVFPLVCGWWLDVCTLKMLGTTISQR
VEFFTMSPLASSSIHWLVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLI
DDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRVAPKTFPLDITIFDPFTEIPVDVLL
FQICIPFAIEHFKPRATIKALLHHWFAVIGWALGLTDFLLPKPEENAAGQENWNGRAERR
DRVHGGMEMVAPQLEQRMIQHAAIDNDGRGNANEANDIAEESDVDDQGDSEYSFALRIIL
LLILAWMTLLIFNAGMIVIPISLGRLVFEAVPRLPITHGIKCNDLFSFSIGCYIIWSAAA
GTRYAVDYIRSRRLGFLVQQICKWCSIVLKSSALLSIWIFVIPVLIGLLFELLVIVPMRV
PIDESPVFLLYQDWALGLIFLKIWTRLVMLDQMAPLVDESWRMKFERVREDGFSRLKGLW
VLHEIITPIITKLLTALCVPYVLARGVFPVLGYPLIVNSAVYRFAWLGCLIFSTLFFCGK
RFHVWFTNLHNSIRDDRYLIGRRLHNFGEDSRRSNEPDETPGSLEDDLALIPLDHQDNDD
VGLRFRGNNRHEDAGVVVG
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatcgtcgacccggccgccgccgccgccggcggcgagccggaggagcaggag
gaggcgcggtcgctctccacggccgcggcggcggccgcggccgcggacgacgacgaggac
gacgaggaggagggggacgtgtgccggatctgccgcaaccgcggcgacgacgagcacccg
ctgcgctacccctgcgcctgcagcggcagcatcaagttcgtgcaccaggactgcctcctc
cagtggctcgaccacagcaactcccgccagtgcgaggtctgtaagcacgcgttctctttc
tcgcctgtctatgctcagaatgctccaaccagacttcctttccaagaacttgtgtttggg
gttgggatgaaagcatgccacgtgtttcagtttgtgctccggcttgcctttgttctctca
gtctggctcatgattatccccttcattacctactggatatggcggttaacatttgtgaga
agtcttggtgaagcacaaaggctgttcttgagtcacatcagcgctcagttgattctcagt
gattgcctacatggatttcttctctcagctatcattgtccttatatttcttggagctacc
tctttaagggactatataaggcacttgagggaacttggaggacatgaagctgacagggac
gatgcaggccgtgaaaggcatggtgcccgagctgtcagaaggctagctggtcctaataac
agggttcctggtgcagatggaaatattgatgacctggctgaagcccaagggcttggtgct
ggggaacttctgaggagaaatgcagaaaatgttgctgctcgattggaaagactagaggcc
caagttgagcagatgttagatggtctggatgatgcggatggtgcggaggatgttcctttt
gatgaacttgttggtatgcaagggccagtatttcacttggttgagaatgcaattacggtt
ttggccagcaatgctatattcctcattgttgtgatcttcgtaccattctcattgggaagg
attgtcctgtattatctatcatggtttttctcttcagcctccagtcctatgctggctagg
gtgatgccatttacggaatctgctatttctttggctaatgaaacattgaatagtgctttt
aatgccatgaagaatttctcttccgacagtcacaatgaaggtgttattgggcatgtgatt
gaggtggttactcagtccttgaagataaatgccactggtcttgctgtaatgcagggcact
gggaagagcagtctggtgaaaggaacagctattggctcatcttatctttcagatctgaca
actcttgctgttggatacatgtttatcttttgccttgtctttttgtacattggatcactg
gctttacttcgatacgcccgtggagaacgttttactattggaagactttatggcatcgct
gcaatactagaggccattccatctctatgcaggcagttcttttctggaatgaagcatctc
atgaccatggtcaaagttgcgttccttttggtgatagaactcggagtatttccccttgtg
tgtggttggtggcttgatgtctgcactcttaagatgttgggtacaacaatttctcaaaga
gttgaattctttacgatgtcacccttggcgagctcctcgatccattggcttgttgggatt
gtatatatgctccaaataagcatatttgtcagccttcttcgaggggtactgcggaatgga
gttctttacttcttacgggatcctgctgatccaaattacaatccttttagggacctgatc
gatgatcctgtgcataaacatgctcgacgagtccttttatctgtcgctgtgtatggaagc
ttgattgtgatgctggtcttcttgcctgtcaaactggccatgcgagtagctcctaaaact
tttcctctggacattaccatttttgacccttttaccgagattccagttgatgtgcttctg
ttccaaatatgcatcccatttgcgattgagcatttcaagcctcgggcaactattaaagct
ctgttgcatcattggtttgctgtgattggctgggcactaggcttaacagatttcttacta
ccaaaacctgaagaaaatgctgctgggcaagagaactggaatggcagggcagaaagaaga
gatagagtacatggtgggatggaaatggtagccccacagcttgagcagcgtatgattcag
catgctgccatagataatgatggtaggggtaatgcaaatgaagccaatgacattgctgaa
gaatctgatgtagatgatcaaggagattcagagtacagttttgcactccgtatcatactc
ttgcttatactggcatggatgacgctactcatattcaatgctggaatgattgttattcct
atctcacttggtcgtcttgtttttgaggctgttccccgcctgccaatcacacatggcatc
aagtgcaatgatctgttctcttttagcatcggttgctatattatctggagtgcagcagct
ggaaccagatatgcagttgactacattagatcacgacgtctgggcttcctggtacaacag
atctgcaagtggtgctctattgtcctgaagagttctgctctcctgtcaatatggatcttc
gttatccccgtgctgattggactcctttttgagctgctggtgattgtacccatgagggtg
cctattgacgagagcccagtttttctgctgtatcaggattgggcacttggattaatattc
ttgaaaatttggactagactggtgatgctggatcaaatggcacctttggttgatgaaagc
tggaggatgaagtttgagagagtaagagaggatggcttctcccgtttgaaaggtctatgg
gtcctgcacgaaatcattacccccatcatcacgaagctccttactgctctatgtgtccca
tacgtccttgcaaggggtgtgttcccggtgctgggctacccactgatcgtgaactcggca
gtctaccgttttgcctggctcgggtgcctgatattcagcacgctcttcttctgcggcaag
agattccacgtctggttcaccaacctccacaactccatcagggatgaccgctatctcatt
ggccggaggctgcacaactttggcgaggactcccgtcggtcgaacgaacctgatgagact
ccaggttcattagaggacgaccttgcgctgatccctctagatcatcaggacaatgacgac
gtcgggctgaggttcaggggcaacaaccgtcatgaagacgcgggggtggttgtcggttaa
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