Triticum dicoccoides (wild emmer wheat): 119328885
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Entry
119328885 CDS
T07278
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119328885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119328885
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119328885
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119328885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
119328885
NCBI-ProteinID:
XP_037457778
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All DBs
Position
7A:complement(406123138..406124489)
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AA seq
294 aa
AA seq
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MSAPPPPASSDDDGKPADEEGVEIREVWANNLEAEFAVIRDVVDDYPYIAMDTEFPGIVC
RPLGSFRSNDEYNYATLKANVDMLSLIQLGLTLSDENGALPARGTGGRPCAWQFNFRGFD
PRSDPANADSIDLLRNSGIDFDRFTTEGADTGHFAELLMSSGVLLNAELQWVTFHSGYDF
GYLLKLLTGRNLPDTMPGFFDLIRIYFPVLYDIKHLMKYCGSLHGGLSKLGELLGVQRVG
ICHQAGSDSLLTLQCFQKLKEAYFRGSTENYAGVLYGLISDGGENRPPAALLIE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccaccaccccccgcctcctccgacgatgatggtaagcccgccgacgaggag
ggcgtagagatccgcgaggtatgggcgaacaacctcgaggcggagttcgccgtgatccgt
gacgtcgtcgacgattacccgtacatcgccatggacaccgagttcccgggcatcgtgtgc
cgcccgctcgggagctttcgctccaatgacgagtacaactacgccaccctcaaggccaac
gtcgacatgctgagcctcatccagcttggtctcaccctctccgacgagaacggcgcactc
ccggccaggggcacgggggggcgcccctgcgcctggcagttcaactttcggggcttcgat
ccgcgctcagaccccgccaacgctgactccatcgacctgctacgcaacagcgggatcgac
ttcgaccgcttcaccaccgagggtgctgacacaggccacttcgccgagctgctcatgtcg
tcgggcgtcctgctcaacgctgagctccagtgggtcacattccacagcgggtacgacttc
gggtacctgctcaagctgctaaccgggcggaacctacccgacaccatgcctggattcttt
gacctcatcagaatctacttccctgtgctgtacgacatcaagcatctcatgaagtactgc
ggcagcctccatggtggcttgagcaagcttggtgagctacttggtgtccaacgtgtgggg
atctgccaccaggctgggtccgactcgctgctgaccttgcagtgcttccaaaagctgaag
gaggcatatttcagaggatcgaccgagaattatgccggtgtattgtatggtcttatttct
gatggtggggagaacagaccaccagcagctctgctcatcgaatga
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