Triticum dicoccoides (wild emmer wheat): 119329117
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Entry
119329117 CDS
T07278
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119329117
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119329117
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
NosD
Motif
Other DBs
NCBI-GeneID:
119329117
NCBI-ProteinID:
XP_037458014
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Position
1B:complement(221698660..221701583)
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AA seq
440 aa
AA seq
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MMEYLIPSVSAPPAHTKSAQMASIVPLFSLLSLFLCCVLAKKDMKVAPLTNWSDHRDRSL
QSNHVFSVLRYGAYGDGRHDDTKALSKAWAAACSSLNPSTVLIPKGKKCLTKHVTFSGPC
KSSIKLMIEGTLVAPPKRSYWIEDTIRHWILFRSVRGLTVTGGGTIDGNGKIWWQNSCKV
NTKLPCRQAPTALTFYSCTNLKVNNLEVLNSQQIHISMERCSDVRMSRLSIRAPGTSPNT
DGIHIAHSKDVKVMDCAIKTGDDCMSIEDGTENLHVKNIVCGPGHGISIGSLGDRNSQAQ
VANITIDGVRLHDTTNGARIKTWQGGRGYAKNIVFKNMIMDNVQNPIIIDQNYCDSATPC
NKQKAAVEVSNVLFKNIRGTSASREAIKLSCSKAVPCHGIALHNVKLTLKRGGGDAKSTC
QNAKWRKLGTVMPQPCSLND
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatacttgatcccatcagtttcagcaccaccagcacatactaagagtgcacaa
atggcttccattgtgccccttttctctctactgtcattattcttgtgttgtgttcttgcc
aagaaagacatgaaagtggcccctttgacaaattggtctgatcatagagaccgatctcta
cagtcaaatcatgttttcagtgtgctcagatatggggcttacggggatggacgccacgac
gacacaaaggcattgtcaaaggcgtgggctgcagcttgctcctctttgaatcctagcact
gtgctcatccccaagggcaagaaatgcctaacgaagcatgtaaccttctctggcccatgc
aaatccagtatcaagttaatgattgaaggtactttggtagctcctccaaagagatcatac
tggatagaggataccattaggcactggattttgttcagatctgtgagaggtcttactgtc
accggtggtgggaccattgatggaaatggaaagatttggtggcagaactcctgcaaagta
aacacaaaactcccttgcaggcaagctccaacggctttgacgttctattcttgtacaaat
ctgaaagtgaataatttagaagtgttgaacagccaacaaatccacatatcaatggagcgt
tgcagcgatgtaaggatgtcacgcctatcaatcagagcacctggcactagccccaacacc
gacggaatccatatcgcccatagtaaggatgtgaaagtcatggactgtgcaatcaagact
ggggacgactgcatgtcaatcgaggatgggactgagaatctacatgtcaagaacatcgtg
tgtggaccagggcatgggataagcattgggagcttaggtgatcgcaactctcaagctcaa
gttgcaaacatcaccattgacggggtgcgactgcacgacacgacaaatggagctcgtatc
aagacatggcagggcgggcggggttatgcaaagaatatcgtgttcaagaacatgataatg
gataatgtacagaacccgatcattatcgaccagaactactgtgactcggctacaccatgt
aataaacagaaagcggctgtggaggtgagcaatgtgttgtttaagaacattaggggaaca
agtgcctcaagagaggctatcaagctcagttgcagtaaagctgtaccttgccatgggata
gccttgcacaacgtcaagcttactctaaaacgagggggtggtgatgcaaagagcacctgt
cagaatgcaaaatggaggaaattgggaacagttatgccacagccatgtagtctcaacgat
tga
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