Triticum dicoccoides (wild emmer wheat): 119329365
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Entry
119329365 CDS
T07278
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119329365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119329365
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119329365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_NWD2_C
PROPPIN
VPS8_N
Nucleoporin_N
Utp12
Beta-prop_DCAF12
Nbas_N
BCAS3_WD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
119329365
NCBI-ProteinID:
XP_037458301
LinkDB
All DBs
Position
7A:complement(712061587..712069452)
Genome browser
AA seq
906 aa
AA seq
DB search
MGIFEPFRAIGYITTGGVPFSLQRLGTETFVTVSVGKAFHVYNCAKLTLVLAGPQLPKKI
RALASFKEYTFAAYGSDIAVFKRTDLVVTFTKHEEKVNMLYLFGEYILSADIKGDLFIWA
FRGAKPSSEPVGNISLGDKFTPTCIMHPDTYLNKVIICSEEGPLQLWNISTKKKVYDFKG
WDSSVRCCVSSPALDMVAVGCADGSIHVHNIRYDEELMSFNHEIRGDVTALSFRTDGQPL
LASGGSSGVISIWNLEKRRLHSVIREAHDGSIVSLHFFANEPILMSSAADNSIKMWIFDN
NEGDARLLRFRSGHSAPPRCIRFYGNGKFILSAGQDRAFRLFSVVQDQQSRELSQRHVAK
RAKKLRVKEEEIKLKPVIAFDCAEIRARDWCNVVTCHTDTSKAYVWRLQNFVIGEHILTP
SSETESLIKACTISACGNFTILGTEGGWIEKFNLQSGISRGSYIDGSLSLQCAHEGEVVG
LACDATNGSLISAGYRGDIKVWDFKSCKLKSKFNVGKSVTKIAYHRANGLLATVADDMVL
VLFDTVSMKMVRRFEGHTDRITDLCFSEDGKWLISSSMDGTLRIWDISLARQIDAMRVDV
SITSVSMSPNMDVLATTHVDQNGVYLWVNQALFSPSTNVDSYASGKHVRNVLLPTVSSAE
RSEEEEPIKKSQDSNQSNIKPFVIMDHQIPDMITLSLLPRSQWQSLTNLDIIKVRNKPIE
PPKKPEQAPFFLPSVPSLSGEILFEPPSSKETDGSTTEDIGHKKMADLSSHFSRLLQSCG
ELESYSAFTDYLKGLSPSSLDMELRMLQIIDDDEVEESEEPRPELHSISLLLDYFIHELS
CRNNFEFVQAVLKLFLKIHGETIRRHSTLQEKVRKLLDVQSKVWQKIDKMFQSSRCMVTF
LSNSQF
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggggatcttcgagccgttccgcgcgatcgggtacatcaccaccggcggcgtgcccttc
tccctgcagcgcctcggcaccgagaccttcgtcaccgtcagcgtcggcaaggccttccac
gtctacaactgtgccaagctcactttggtccttgccggacctcaactgcccaagaagatc
cgcgctctggcatccttcaaggaatacacatttgctgcatacggaagcgacatcgcggtt
ttcaaacggaccgatctggtggttacctttactaaacatgaagaaaaggtcaacatgctg
tacctgtttggagaatacattctcagtgcagatattaaaggtgatttatttatctgggcc
ttcagaggagctaaaccaagcagtgagcctgttggaaacatatcactgggagacaagttt
actccaacctgcattatgcatccggatacttacctaaataaggtcattatttgtagtgaa
gaaggacccttgcagctgtggaatatcagcacaaagaaaaaagtatatgattttaagggt
tgggattcatcagtacgttgttgtgtttcttcacctgctctggatatggttgcagtcggt
tgcgccgatggatctattcatgttcacaatatacgatatgatgaagagttgatgtctttc
aaccatgaaattcggggtgatgtaactgccctgtcatttcgaacagatgggcaacccctt
ctagcatctggaggttcctcgggtgttattagcatttggaatcttgagaagagaaggctg
cactctgtgattagggaggcccatgatggttctattgtatcacttcatttctttgccaat
gaacctattttgatgagctcagcagctgataattcaataaaaatgtggatatttgataat
aatgaaggagatgctcgtctgttacgatttcgaagtggacatagtgctccacctcggtgc
ataagattctatggcaatggaaaattcatcttatccgctggtcaagaccgtgccttccgt
cttttctcagttgttcaggatcaacaaagcagagagctttctcagcggcatgtggcaaaa
agagcgaaaaagcttagagtaaaggaggaagagataaagctaaaaccagttattgcattt
gattgtgctgagatacgtgcacgtgattggtgtaatgttgttacatgccacacggatact
tcaaaggcatatgtatggcgtcttcagaactttgttataggcgaacatattcttacacca
tcgtcagagactgagtcactgattaaggcttgtactataagtgcatgtggtaattttact
atcttgggcactgaaggtggttggatcgaaaaatttaaccttcaatctgggattagtcgt
ggtagttacattgatggctctctgtcattgcaatgtgcacatgaaggtgaagttgttgga
ttagcctgtgatgcaacaaatggatctctgattagtgctggataccgtggggatattaag
gtctgggattttaagagttgcaagctaaaatccaaattcaatgttggtaaatctgtaact
aagattgcatatcaccgggcaaatggtcttcttgctactgtagcagatgatatggtgctt
gtattgtttgatacagtatcaatgaaaatggtccgtagatttgaaggacatacagatcgt
atcactgatctgtgtttcagtgaggatgggaaatggctcatttcgtctagtatggatggg
acgctcagaatatgggatatcagtttagcaagacagatagatgcgatgcgcgttgatgta
tctataacatccgtctctatgtctcctaatatggatgtgctggcaaccacccatgttgat
caaaatggcgtgtatctttgggttaatcaagctttgttctcaccttcgacaaatgttgat
agctatgcaagtggtaaacatgtccggaacgtgcttttgccaactgtttcgtcagccgaa
agatctgaggaggaagaacccattaaaaaatcacaagattcaaatcaatctaatattaaa
ccttttgtcataatggatcatcaaataccagacatgatcacactctcattactcccaagg
agtcaatggcaaagcttgacaaatcttgacattataaaggttcgaaacaaaccgatcgag
ccacctaagaaacctgagcaggcgccatttttcttgccctcagttccatccctttcaggg
gagatattgtttgagcctccttccagtaaagaaacagacggcagcactactgaggacata
ggtcataaaaagatggccgatctctcctcccacttcagtcggttgttacaatcctgtgga
gaacttgagagctattcagcgttcaccgactacctaaaaggcctatctccgtcatcctta
gatatggaactacggatgctacagataatagatgacgacgaggtggaagagtctgaggaa
ccaagacccgagctccattccatttcattgctgctggactacttcattcatgagctttcc
tgcaggaacaacttcgagtttgttcaagctgttctgaaattgtttctgaagatacatggt
gaaacaatacggcgccactcgacgctacaggagaaagtgaggaaacttctagacgtccag
agcaaggtctggcagaagatcgacaaaatgtttcaaagctcgcgatgcatggtcacattc
ctcagcaactcgcagttttag
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