Triticum dicoccoides (wild emmer wheat): 119329369
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Entry
119329369 CDS
T07278
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119329369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119329369
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119329369
mRNA degradation factors
5'-3' decay
Decapping complex
119329369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
DUF445
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
119329369
NCBI-ProteinID:
XP_037458302
LinkDB
All DBs
Position
7A:198196762..198205658
Genome browser
AA seq
1308 aa
AA seq
DB search
MASPSGNPNPNPNVPFELSRLFKPPPNPNHPTTVPTPAGIFPGGPPGAPMATGPPGPYSY
PPATPPFHRNPYLNYPTDPNAVHLPVAAFANPNPTGNPIPNSNPGPNPGARLMQLLGNTA
PTHLESVVSMPPTSSEFSGGPVAPLPGMPSAPPARMTSTSSKMPRGRLLGPGDRAVHDVD
SRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALRSL
LRGHTQRVTDMAFFAEDVHRLASASVDGRIYVWKIDEGPDEENKPQITGKIEMAIQIVGD
AGTYHPRICWHSHKQEILFVGIGNCVLKIDTTKVGRGRDFSKEEPLKCSLDKLIDGVHLV
GKHDGDVTDLSLSQWMTTRLASASKDGTVKIWDDRRTVPLSVMKPHDGKAVYSVSFLTAP
EQPNHINLVTAGPLNREVKIWASSDKEGWLLPSESETWRCTQTLELVSSLENRFEEAFFN
QVAVLPQASLILLANAKKNAIYAIHVEYGPDPASTRLDYIADFTVAMPILSLTGTHESQP
DGEHVVQVYCVQTMAIQQYGLELLLCLPPTADNAGLGRDLAISHVYERPLEVASVESSTE
TKPLSDHQGTEADTATHVSSPTPSSNMDNAGSYAEAVLRREASRGPSLGDHDGDKSSFDY
SKKRMDSDGTSGQGAFDRKDCFGNEEPRGGQVDGTVSDPHPTFKVGVNATHLITPSEIIS
GVLPSAESTANGSPQNVEMESKLVAEKKADQNIGFEDVKETQIVQEKMERLNMSSEQTVE
TISERSVTTDKYSVEDSQRSDPTLLKQHSGARDENLPRRTAEATENINGSSSRNLQLPSA
TKEEKVLHPQVSGQMSPLTSTFNSTDSSHEHPSNTNPAIDSVPQVAAIQGTLQQLMAMHT
DMQKQLNAIVSAPIAKEGKRIETSLGRNIEKSIKANVDAMWARIQEENARHEKVERERMQ
QISTLITTSVNKDIPAILEKSLKREISLLGPTIARTTTPIIEKSLSSAVSDSLQKVLGEK
VANQLDKSISTKLEATVAKQIQTQFHTSAKQALQDALRSSFESSIIPAFEQSCKTMFEQV
DGAFQKGMSEHGTAIQQQVAAAHSPLAQTLRETINSASSITQGLTSELLDGQRKLLALVA
SGNPISHNTSALQPINGPIPNLPEADVPLDPMKELTRLLSEQKFDEAFTMALQRSDVSMV
SWLCSQVDLQGLCRLNPVPLNQGVLLALFQQLACDIANDTPLKLQWMTAVAMAIQPTHQM
IAAHVRPIFEQVYGVLARQQSVPGTSPLEANNIRLMMHVINSVMMTHK
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccctccggaaaccctaatcccaaccccaacgtccccttcgagctcagcagg
ctcttcaagcctcccccaaaccctaaccaccccacaaccgtgccgacccccgctggcatc
ttcccgggcggcccgcccggcgcgccgatggccaccgggccgccgggcccctactcctac
ccgcccgccaccccgcccttccaccgcaacccgtacctcaactaccccaccgatcccaac
gccgtccacctccccgtcgccgccttcgcgaaccctaaccccactggaaaccctatccct
aactccaaccccggccccaatccgggagctcggctcatgcagctgctgggcaacaccgcg
cccacccacctcgagtccgtggtgtccatgccgcctacgtcatcggagttctctggcggc
ccggtggcgccgctgccagggatgccgtcagcaccgccggcgaggatgacaagcacaagc
agcaagatgccccggggcaggctgctgggaccgggggacagggccgtgcacgacgtggac
tcgcggctgccaggggaggcgcagccaccgcagctggaagtgacgcccatcaccaagtac
acctcggacccggggttggtgctgggccggcagatcgctgtaaaccgaacgtacatcgtg
tacggcctcaagcttggcaacatccgcgtgctcaacatcaacaccgcactccgctcgctc
cttcgtgggcacacacagagggtgacggacatggctttctttgcagaagatgtccatcgt
ttagcaagtgcaagcgtagatgggcgtatatatgtatggaagattgacgagggacccgat
gaggaaaataaaccacaaatcacaggaaagattgaaatggccatccagatagtaggagat
gctggaacttaccatccgagaatatgttggcactcccataagcaagaaattctgtttgtt
ggaatagggaactgtgtcttaaaaatagacacaacaaaagtgggaagaggaagagacttc
agtaaagaagagcctcttaaatgttcacttgataagctcattgatggtgtgcacttggtt
ggtaaacatgacggggatgtcacagatctgtccttatctcaatggatgactacccgtctg
gcttcagcatcaaaagatggcacggtaaaaatctgggatgatcgcaggacagtgccttta
tctgtgatgaaaccgcatgatggtaaagctgtttattcggtttctttccttacagcacca
gagcaaccaaatcatataaatctcgttacagcggggcctctcaaccgagaagtaaaaatc
tgggcttcctctgataaggaaggttggttgttgccaagtgaatctgagacttggagatgc
actcaaactctggaacttgtgagttctctggaaaataggtttgaggaagcatttttcaac
caagtagcagtgttgccacaagctagccttattttgcttgcgaatgccaaaaagaacgct
atatatgctatccatgttgagtatggtccggatcctgcttctactcgtctggactatata
gcagatttcacagttgcaatgcctattttaagtctgacgggaacacatgaaagccagcct
gatggtgaacatgtagtacaagtctattgtgtccagacaatggctatccagcagtatgga
ttggagttattactctgtttgcctcctacagctgataacgctgggcttggtagggatctg
gctatttcccatgtatatgagagacctctagaagtggcatcagtggagtcatcaacagaa
actaaaccactgagtgatcatcagggaacagaagctgatactgctactcatgtttcatcc
ccaactccttcatcaaacatggataatgctggatcttatgcagaagctgtcttgagaaga
gaagcttcaagaggcccatctcttggtgatcatgatggggacaagtcatcttttgattat
tcaaagaaaaggatggattctgatggtacaagtgggcaaggagcatttgataggaaggat
tgctttgggaatgaagagccaagaggtggccaggttgatggtacagtttcagatcctcat
cccacgtttaaggtcggagtgaatgccacacacttgattaccccatctgaaattatttca
ggtgtgctcccatctgctgaatcgactgctaatggcagcccacagaatgtagaaatggag
tcaaaacttgtggctgagaaaaaagcagatcaaaatattggatttgaggatgttaaggag
acccaaattgttcaagagaaaatggagagacttaacatgtcttcagagcaaactgtagag
acaattagtgaacgctcggtaacaactgacaagtacagtgtggaagattcacagagatca
gaccccacacttctgaaacaacattctggtgcgcgggatgaaaatcttccaagaagaaca
gctgaagctactgaaaacatcaatggctcttcgtcaaggaacttgcagttaccctcagct
accaaagaggagaaagttctgcatcctcaggtgtctgggcagatgtctcctcttacaagc
accttcaactctactgattcatcacatgaacatccaagcaatacaaaccctgccattgat
tctgtcccgcaagtagctgccattcaaggaacattgcaacagcttatggcaatgcatact
gacatgcaaaagcagctgaacgcaattgtgtctgctcctattgcgaaggagggcaaaagg
atcgagacatcactcgggcgtaatattgagaagtccataaaggctaatgttgatgccatg
tgggctcgtatccaggaggaaaatgcaaggcatgaaaaggttgaaagagagcgaatgcag
cagatttctactctaatcacaacttctgtaaacaaggacattcctgctatactggagaaa
tcattaaagagagaaatatcgttgttgggacccaccattgcaagaacaacaacacctatc
attgagaagtccttgtcttctgctgtttcggattcgcttcagaaagttcttggggaaaag
gttgcaaatcagctggataagtccataagtacgaaacttgaagctactgttgctaagcag
atccaaacacagttccatacatctgccaagcaggcacttcaggatgctttacggtcaagc
tttgagtcatcaattatcccagcatttgaacaatcttgtaagacaatgtttgagcaagtg
gatggtgcattccagaagggcatgtctgagcatggtactgctatccagcagcaggtcgca
gcagcacatagtccattggcacagactttaagggaaacaatcaattcagcatcatcaatt
acccagggtcttacgtcagagttacttgatggtcagcgcaagcttttggcactagttgca
tcagggaacccaatatcacataatactagtgctttgcagcccatcaacggaccaataccc
aatctccctgaggctgatgttccactggacccgatgaaggagctaaccagactattatct
gagcaaaagtttgatgaggcgtttacgatggctcttcaaagaagtgacgtctccatggta
tcttggttgtgctctcaggttgatttgcaaggtctgtgtagactgaaccccgttcctctg
aaccaaggggtccttctggcccttttccagcaactggcatgcgacatagccaacgacaca
cctctgaagcttcaatggatgacagcggtcgccatggcaatccaaccaacccatcagatg
attgcagcgcatgtgaggccaatatttgagcaagtctatggtgtcttggcccgccaacag
tcggtaccaggaaccagcccactggaagcgaacaacatccgcctaatgatgcatgtaatc
aactcggtgatgatgacccacaagtga
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integrated database retrieval system
