Triticum dicoccoides (wild emmer wheat): 119329431
Help
Entry
119329431 CDS
T07278
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119329431
Membrane trafficking [BR:
tdc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119329431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
119329431
NCBI-ProteinID:
XP_037458373
LinkDB
All DBs
Position
7A:complement(4787301..4796148)
Genome browser
AA seq
1656 aa
AA seq
DB search
MGSDSDDADFFDKLVDDDDDDAKAPPASAKVPPSAADEAAAAADLAALTLSDGDGDGDED
APATGGAPEPEPAAAVVAPQTAAEAPTDAADPPPPAPQPEAEALAAPRDAEVLTAAPDAG
VLAAAPDNEVPAGLPEVKAVAAADPEGRSPGSGSGSGSSKGVRTTVKQVQWSLFGADITS
GTEPDPFSDLLADDTFLGAGVQGAQVSGMGASSVGAVDHSFFNGVGSSNASSQLGWGTGS
GEFLADGGVGEDAFFGVQGSAVGTAGSIVAADHSFFNGVDGNANSQSYMGAGVVESADHQ
NTSAQSDWTAGSVDPSDPYPGWKWDVATGQWYQVDAIGAQGFADHGGAVAAFGSENVQQQ
HLGVSYLQNSSQAGLETITEEGSAAAASWGQDQSSAAAAEYPPNMLFYAEYPEHYYDTNT
QQWFTLESYQQSVLQAATPASAVDAFAGAGHSVAHTGNTQASSFNQQNQWQHGSVANSMQ
PYTENQISQPAYTEPLKPSTNYGTAINTFVPNINTFVPSTSQYSGSGEGHQVSKKVFQPT
SYQSAAHKGFEPYKNNQSAINTFLPSTSQYNSSGEGYQVSNKGFQPTSYQTAAHKGFEPH
KNNQSAINTFLPSTSQYSGGGEAHQVSNKGFEPTSHQSAHKGFEPYKINQSTSASHDSGS
RGFEPSQGHQGFKPFTNNQRSTGFVPSTSHQIAHKEFEPPKDNQAHHVAHQSSSGHGYDY
PNGFVEPQKGVPVTSMYQMQTQTDPATHMHLPNNYVSNENSMSFPQQLAPSQQLGYSHHE
ERSSAGRPPHSLVAFGFGGKLVVMKETSSMTTNFDSGNQGNSQGTLSILNISEVVADKID
QQGIPNGSALSYFYALCRRPIPGPLAGGSAAAKDLNKWLDDIIGGYESSVSDFQGGDIQK
LLISLLKISYQHYGKLRSPFGPDPSREGMDGPDTAVTALFSSCSSNSARMRDHCMKNIPS
ENQIQATAQEVQNLLVSGKRKDALQYAQEGQLWGPALILALQLGDQFYADTVKKMAYCHF
KSGSPLRTLCLLIAGQPADVFKPENPVDANYATLHTQQQPAEGTPVGMLNDWQQNLAIIT
ANRTKADELVITHLGDCLWKERNEVAAAHSCYLVAELNIDPYSESARMCLVGADHLRCPR
TFSSPEAIQRTELYEYAKVLGNSQYILLPFQPYKLIYAYMLAEVGKVSDSLKYCQASLKL
LKSSGRAPELEAWKQLFSSLEERIRTHQQGGYGTNLAPKLVGKIFSTFDKSLSRMMGTQT
QPAPVPPLSQGSFGDRDFYPVPQVTNPAPPVTNFVNSQSPMPMSSSTSEQFMSEIAENSD
PDKKGAHSRSVSAPDLKKKQGGGSDNAQSTSGSGSSRFGWLLQKTVGLVSKSSNQAKLGE
ENSFYYDENLKRWVERGAAIPAAAEPPLAPPPTKASFQNGVPDHNNSTGPPSGGGYTPNG
FSEAKPPNPSEPVSGMPPMPPSQNQFSARGRAGVRSRYVDTFNKGGGGGNSFGGPSYNRP
AMPSVNKLPAASFFVPNPAADASLQPTEPTADAHSETANQDGPSSSPAVESSFYASPPPP
MQIQPGMQRHPSMDNIMTPSGSGNGSFSKSRAASWSGTYSEQMSSTAASRSPDGQTMQSP
PMMPGVRPSHSRSHSNSSLNWFNSGGFGEDLQEVEL
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgactccgacgacgccgacttcttcgacaagctcgtcgacgacgacgacgac
gacgccaaagcgccccccgcctccgccaaggtgcccccctctgccgccgacgaggccgcc
gcggccgcggacctcgcggccctcaccctgtccgacggcgacggcgacggcgacgaggac
gcccccgccactggaggggcgccggagcccgagcccgcggcggccgtggtggcccctcag
acagcggctgaagccccgactgacgccgcggatcctccgcctcccgctcctcaacccgag
gctgaagccctggcagcgccccgtgatgctgaggtcctgaccgcggcccctgatgccggg
gtcctggccgcggcccctgacaacgaggttccggctgggctacccgaggtgaaggcggtg
gccgctgctgaccccgagggcaggtcgccgggttcagggtccggctcaggctcctccaag
ggcgtccgtaccacggtcaagcaagtgcagtggagtctcttcggcgccgacatcaccagc
ggcaccgagccggatccgttcagcgacctcctggccgacgacacatttctcggagccggg
gtccagggagcgcaggtgtcaggtatgggtgccagcagtgtcggagccgtggatcacagc
ttcttcaatggggtgggcagcagcaatgccagttcccagctgggctgggggactggttca
ggggaattcctcgcggatggcggtgttggtgaagacgcctttttcggggtgcagggttcg
gctgtggggactgctggtagcattgtggcggcggatcatagcttcttcaatggagtggac
ggcaatgccaattcgcagtcgtatatgggtgctggtgtcgtggagtctgcggatcatcag
aacaccagtgcacagtctgactggaccgccgggtctgtggacccctcagatccctaccct
ggctggaagtgggacgtggcaacagggcagtggtatcaggtggatgcaataggtgctcaa
ggctttgctgatcatggcggtgctgtagcggcctttgggagtgaaaatgttcagcagcag
cacctcggtgtttcgtacctgcagaactcttcacaggcagggttggagaccatcacagag
gagggcagtgccgctgccgcgagctggggccaggatcagagcagcgcagccgcagcggag
tacccaccaaacatgctcttctatgctgagtaccctgaacattactatgacaccaacact
cagcagtggttcacgctcgagtcatatcagcaaagtgtcttgcaagctgcaactccggca
tcagcagtagatgcatttgctggggcaggtcacagtgtagctcatactgggaatactcag
gcaagtagttttaatcagcagaaccaatggcagcatggttcggtagccaacagcatgcag
ccttataccgagaatcagattagtcagccggcgtatactgaacctttgaagccctctaca
aattatggaactgctatcaacacattcgtgcctaatatcaacacattcgtgccttctaca
agtcaatacagtggtagtggcgagggccaccaggttagtaagaaggtcttccaacctacc
agttatcagagtgctgctcacaagggttttgaaccgtataaaaacaatcaaagtgctatc
aacacatttttgccttccacaagtcagtacaatagtagtggtgagggctaccaggttagc
aacaagggtttccaacctaccagttaccagactgctgctcataagggttttgaaccgcat
aaaaacaatcaaagtgctatcaacacatttttgccttctacaagccaatacagtggtggt
ggtgaggcccaccaggttagtaacaagggtttcgaacctactagccatcagagtgctcac
aagggttttgaaccgtataagatcaatcaaagtacttctgctagccatgacagtgggtcc
aggggatttgagccttcacaaggtcaccaggggtttaaacctttcacgaataaccagaga
agcacaggatttgtaccttccacaagtcaccagattgcccacaaggaatttgaacctccg
aaagataatcaagctcaccatgtagcacaccaatcttcatcaggccatggttatgactat
ccaaatggctttgttgagccacaaaaaggtgttcctgtgacaagcatgtaccagatgcaa
acacagactgatcctgccacacacatgcatttaccaaataactatgtgagcaatgagaac
tccatgagctttcctcagcagctagctccatctcaacaactcggttactcccaccacgag
gagaggtcgtcagctggacgcccaccgcattcgctggttgcgtttggatttggtgggaag
cttgtagttatgaaagagaccagctcgatgactacaaactttgacagtggaaatcagggc
aattctcaaggcacgctatcaattcttaatatatcggaggttgttgctgataaaattgat
caacaagggatccctaatggcagtgcacttagctacttctatgctttgtgtcgtcgacct
attcctggcccccttgctggaggaagtgctgcagcaaaggacctgaataaatggcttgat
gatattatcggaggctacgagtcttctgtcagcgatttccaaggaggggatattcaaaag
ctgcttatatcgttgctgaaaatatcatatcaacactatggaaaactccgttcacccttt
gggcccgatccatcgcgtgagggtatggatggcccagacactgcagtaacagcacttttt
tcatcatgtagtagtaatagtgcccgtatgagagaccattgcatgaaaaatatcccctca
gaaaaccagatacaggctactgctcaagaagttcaaaatcttctagtttctggtaaaagg
aaagatgcgcttcagtatgcgcaggaaggtcagctttggggacctgcactgatccttgct
ttacaacttggtgatcagttttatgcggatactgtgaagaaaatggcttactgtcatttc
aaatctggatcacctttgaggacattgtgccttcttattgctggacaaccagcagatgtt
tttaagcctgagaaccctgtcgatgccaattatgccactttacatacgcagcaacagcct
gcagagggtactcctgtgggcatgctgaatgactggcaacaaaatttggcaattataact
gcaaacaggacaaaagcagatgagcttgtaatcactcaccttggggattgcctttggaaa
gagagaaatgaggttgcagctgctcattcatgctatttagttgctgagctaaatatcgat
ccatactccgaaagtgcaagaatgtgtttagtcggagcagaccatctgagatgtcctcgc
acatttagcagccctgaagctatacagagaacagagttgtatgaatatgcgaaagttctt
ggtaattctcagtatatcctcctgccatttcaaccatataagctgatatatgcatacatg
cttgcggaggttgggaaggtctctgattcactaaagtactgtcaagcatctttgaagctg
ctgaaatcctctggccgtgcgcctgaactagaagcatggaagcaattgttttcatctctg
gaggagcggatacgcacccaccagcagggtggatatggcacaaatcttgctccaaagctt
gttggaaagattttctcaacatttgataaatctttgtcccgcatgatgggtacacaaaca
caacccgcaccagtgccgccattgtcacagggctcttttggtgacagagatttctatcct
gttcctcaagttacaaatcctgctcctccggttacaaactttgtaaatagtcagtcaccg
atgcctatgtcatcttctacttcggagcagtttatgagtgaaatagcagaaaatagcgac
cctgacaagaaaggcgcacatagcagaagtgtctctgcaccagacttaaagaaaaaacag
ggtggtggatcagataatgcgcaaagcacatcaggttcaggcagttcgcgattcggatgg
ttgctgcagaaaacagtggggcttgtttcgaaatcttccaaccaggccaagttgggggaa
gagaacagcttctactatgatgagaacctgaagcggtgggtggagcgaggtgctgcgatc
cctgctgctgcggagcctccccttgccccacctccaacaaaagcctcgttccagaacggc
gttccagatcacaacaactcgactgggccccccagcggcggaggttatacacctaatgga
ttttcagaagcgaagcctccaaatccttcggagccggtttcagggatgccgccgatgcca
cctagccagaatcagttctcagcacgcgggagggcgggtgttagatcaagatacgtcgac
acattcaacaagggtggtggtggtggaaactccttcggagggccatcatacaacagaccg
gccatgccatcggtgaacaagctgcccgccgccagtttcttcgtcccaaatccagccgca
gatgcttcattgcagccgaccgagccaacagccgacgcgcacagcgaaaccgcaaaccag
gacgggccatcgtcctcaccggccgttgagtcctcattctacgcctccccgccgcccccg
atgcaaatacaaccaggcatgcagcggcacccgagcatggacaacatcatgaccccctct
ggcagcggcaacggctccttctcgaagtcacgggcagcatcatggagcgggacatactcg
gagcagatgagcagcaccgccgcctcgagatcgccggacgggcagaccatgcagtccccg
ccaatgatgcccggcgtaagaccttcccacagccgctcccacagcaactcgtcccttaat
tggttcaacagcggtgggttcggggaggatctccaggaggtggagctttga
DBGET
integrated database retrieval system
