Triticum dicoccoides (wild emmer wheat): 119329588
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Entry
119329588 CDS
T07278
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119329588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119329588
03036 Chromosome and associated proteins [BR:
tdc03036
]
119329588
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119329588
Coactivators
SAGA/TFTC/STAGA complex
119329588
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119329588
STAGA complex
119329588
TFTC complex
119329588
SAGA complex
119329588
SLIK complex
119329588
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_C
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_EIPR1
ASA1
Beta-prop_IFT140_1st
Beta-prop_DCAF4
PAC11
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
SHKBP1_KCTD3_C
Cytochrom_D1
Beta-prop_ACSF4
RecX_HTH3
PALB2_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
119329588
NCBI-ProteinID:
XP_037458550
LinkDB
All DBs
Position
7A:complement(706555364..706565321)
Genome browser
AA seq
656 aa
AA seq
DB search
MEDEEMERKVQQYLHRKGFRLTELALQEERNRLSTTSLSDVSLSRPDNDPARYYDGYNKL
RSWAYNSLDQYKHELLRVLYPAFIHCFMDLVSEGHTLEARQFFLKFREDHELMHSRDLQK
LEGTLSPLHLEEMDLAQSLRENKFRIKLCEYSYELLLQYLQKTQALVMLGIINERIIFEV
SAGQPSLISDDADVVALVGTSKDLAKQINQKEVHWGLLEDSVEERMEKALSDSDRAEAES
KDADAEDNNKKKSSLGGKQGGPLNKKLKKDKLVGATGKNTKSETSMISAAPRVKPELTLP
AAPVEVEQSILEDLRNRAQLNNLALPSVSFYTFLNTHNGLNCSSISNDGSLIVGGFSDSS
VKVWDMAKIGQPAKTSSSQGENGSSQDERLSSTSEGKRPYTLFQGHSGPVYSAAFSPFGD
FLLSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDK
IQPLRIMAGHLADVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRMFIGHRSMVLSLA
MSPDGRYMASGDEDGTIMMWDLSTGRCVSPLAGHNSCVWSLAFSCEGALLASGSADCTVK
LWDVASSTKALKMDDTKAGSTNRLRLLKALPTKSTPVYNLRFSRRNLLFASGALSL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggagatggagaggaaggtgcagcagtacctgcaccgcaagggcttccgc
ctcaccgagctcgcgctgcaggaggagcgcaaccgcctctccaccacctccctctccgac
gtctcgctctccaggccggataacgacccagcaagatactatgatggctacaacaagcta
agatcatgggcatacaattctctggaccaatacaagcatgaattactccgtgtcctttat
ccagcgtttatccattgcttcatggatctagtgtcagaggggcatacactagaagctcgg
caatttttccttaaatttcgggaagatcatgaactgatgcattcaagggatctccaaaag
ctggaaggcactctttctcctttgcatttggaggaaatggatctggcccaatctttaagg
gaaaataaattcagaattaaattatgtgagtattcatatgaattacttctccagtatctc
cagaaaacacaagctctcgtgatgcttggaataatcaatgaaagaataatttttgaagta
tccgctgggcagccttcattgatctctgatgatgcggatgttgttgctctggttggaacc
agtaaggacttggcaaaacagataaatcagaaggaagtgcattgggggttgcttgaagat
tcagttgaggagcgcatggagaaagcactctcagattctgatagagctgaagcagaaagc
aaggatgcagatgcagaagataataacaagaaaaaatcctcattaggtggaaagcagggc
ggtcctcttaacaaaaagctcaaaaaggataagcttgtaggcgcaacaggaaaaaatacg
aaatccgaaacaagcatgatttctgcagcacctcgtgtgaaaccagagctaacccttcca
gcggcgcctgttgaagttgaacaatcaattcttgaggacctgcggaaccgtgcacaattg
aataacttggcattgccatctgttagcttctacacattccttaatacacataacggatta
aactgctcatcgatatcaaacgatggatctttgatagttggtgggttctcagactcatca
gtgaaggtttgggatatggcaaagattggtcaaccagccaaaacatctagttcacaagga
gagaatggatcttcacaggacgagcgcttgtcatcaacatctgaggggaaaagaccgtat
acattattccaaggtcattctggaccagtttattccgctgcctttagtccatttggagat
tttctcctgtcatcatcttcagattcaacaattcggctatggagtaccaagttgaatgcc
aatcttgtttgttacaaaggacacaattacccggtttgggatgtccaatttagtccagtc
ggccattattttgccagtgcctcgcatgacaggactgctcgaatatggtcaatggataaa
atccaacctttgcggataatggctgggcatcttgctgatgttgattgtgtgcaatggcat
gtaaactgtaactacattgccaccggctctagtgacaaaactgtaaggctatgggatgtt
caaactggtgaatgtatacggatgtttattggtcataggagtatggtcttgtccctggca
atgtctcctgatggccgatacatggcctccggagatgaagatgggaccatcatgatgtgg
gatctctctactggtcgctgcgtttcaccactagcaggacacaactcttgtgtgtggtca
cttgctttcagctgcgagggagcattgcttgcatctggatcagctgattgcactgttaaa
ctctgggatgtcgcgtccagcacaaaggccctgaagatggatgacaccaaggctggttct
acgaaccgactgaggctgctgaaagctctccctacaaaatcgactcctgtttataacttg
cggttttctcggaggaatctattgtttgcgtctggcgctctctcgctatag
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