Triticum dicoccoides (wild emmer wheat): 119330582
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Entry
119330582 CDS
T07278
Name
(RefSeq) uncharacterized ATP-dependent helicase C29A10.10c-like
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119330582
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119330582
5.6.2.5 RNA 5'-3' helicase
119330582
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119330582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
UvrD_C_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
119330582
NCBI-ProteinID:
XP_037459597
LinkDB
All DBs
Position
1B:complement(256131741..256145541)
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AA seq
1368 aa
AA seq
DB search
MGSRGRMLFDLNELPTEADEEEAAVVVSQPQLPVPNMYPSNLFPPQEVPWSQGILNNHAF
NHASSGSGFQPFVRSTDSQNVKNSMNTEENLDTTAASTSVVTNHLSDSVVCPTGPSNQVP
QSVEREEGEWSDADGASDTAGSSVSNKEESAGTASTQVKRESQESGPAIVKCSDVIKDDI
AAEPGDTEMSDVSKGPVLHGPTGLESMKTSESKGSQPVDDLDQCTKSKDVRGVEASYALK
CTNNPAKRPKLDDHKVAMLGKKRARQTVFINVEDAKQAGTMKTITPRRQSSFPAPIVTRT
VKEASRGVGERAADKQSQPVIRDQRQSEMIGSERSNSADPCDQNGESNGDFELGSHGRSK
KMNAEEPPSDSYQQSVPRQAFSKQPTDSKQFKGRPVSSQRALLTGQHTADQKPANKRSLV
PKKQASVNNTQYNDTSVERLIREVTNGKFWHNPEEEELQCVPGSFDSAEEYIRVFEPLLF
EECRAQLYSSYEESLEAVSRDAHVMVRVKSVDRRERGWYDVIVLPTHEYKWTFKEGEVAI
LSSPRPGSAAQSSRSNRKTAASNEDAEADCGRLVGTVRRHTPIDTRDPIGAIIHFYAGDS
FDCSSETNVLRKLQPGSTWYLTGLGSLATTQREYVALHALRRLNVQMQNAILQPSPEHFP
KYQEQPPAMPDCFTPSFSDHINRTFNGPQLSAIHWAAMHTAAGTSNGVVKKQEPWPFTLV
QGPPGTGKTHTVWGMLNVIHLVQYQHYYAALLKKLAPESYKQVGSTTNSSSEAFAAGSID
EVLQSMDQNLFRALPKLCPKPRMLVCAPSNAATDELLSRVLDRGFIDGEMKVYRPDVARV
GVDTQSRAAQAVSVERRTEQLLMKGRDEVIGWLQQLKGREQQLSQEIGLLQRELNIVAAA
GRSHGSVGVDPDVLAHRDRNRDILLQKLAASVESRDKVLVEMSRLLILESRFRVGSNFNL
EDARSNLEASFANEAEIVFTTVSSSGRRLFSRLSHGFDMVVIDEAAQASEVGVLPPLALG
AARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQQAGCPTILLSVQYRMHPQIREFPS
RYFYQGCLTDSESVVKLPDELYYKDALMAPYIFYDISHGRESHRGGSSSYQNVHEAQFAL
RLYEHLQRLVKVNGGKKASVGIITPYKLQLKCLQREFEEVMNTEEGKDIYINTVDAFQGQ
ERDVIIMSCVRASNHGVGFVADIRRMNVALTRARRALWVVGNASALMQSEDWAALVADAK
ARKCFMDLDSIPKDFLAMKISSNTPGRNSSNNPRNLRTGGPRPRHLDMLPDPRIGMRADE
DERPNSVPRNASYRNLDDLGRSGDRSRESLQFGVAKRPNSSNGSRREV
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggggtctcgtggaaggatgttatttgacctcaatgagctcccaacagaagctgacgaa
gaagaagctgctgttgttgtgtcccaacctcaacttcctgttcccaatatgtatccctca
aatttgtttccaccacaagaagtgccttggtcacaagggatattaaacaatcatgccttt
aatcatgcatcttctggttcaggttttcagccttttgtgagaagtacagattcacaaaat
gttaagaattctatgaatacagaagagaatttggatactactgcggcttctacatctgtg
gtaactaatcatctatctgatagtgttgtgtgtcctactgggccctccaatcaggttcca
caatcagttgaaagagaagagggagagtggtctgatgcagatggtgcttctgacacagca
ggtagtagtgtcagcaacaaggaagaatctgctggtactgcaagtactcaagtgaaaaga
gagtcccaagagagtggacctgctattgttaaatgtagtgatgtgattaaagatgacatt
gctgctgaacctggtgacactgaaatgtctgatgtgtctaaaggtccagtccttcatggt
ccgacaggactagagagcatgaaaacttctgaatctaaaggaagtcaacctgtggatgat
ttggaccagtgcactaagtcaaaggatgtcagaggagtagaagccagttatgcattgaag
tgcacgaacaaccctgcgaagagacctaagttagatgatcacaaagttgcaatgcttggt
aaaaagcgagcgaggcagactgtgttcatcaatgttgaggatgcaaaacaagctggcaca
atgaagacaattacaccgaggagacagtcatcttttccagcaccaattgttacacgtacc
gtgaaggaagcttctcgcggtgttggtgaaagagctgcagacaagcagagccaaccagtc
atcagggatcagagacaatctgagatgattggttcagaaagaagtaattctgcagatcct
tgtgaccaaaatggagaatctaatggtgattttgagttgggatctcacggcaggtcaaag
aaaatgaatgccgaagaacccccctcagatagttaccaacaatctgtgccaaggcaggcc
ttttcaaagcagcccacggattccaagcagttcaaaggcagaccagtctcttctcaaaga
gcacttctaacaggacaacatactgcagatcagaagccagctaacaaaaggtctcttgtt
ccaaagaagcaagcttcagttaataatacacagtataatgacacatctgtcgaacgactt
atacgggaagtgacaaatggcaagttctggcacaatccagaggaggaagaacttcagtgt
gttcctggaagctttgattctgccgaggagtacattagagtttttgagcctttgcttttt
gaggaatgcagagctcagctatatagttcctacgaggagagtcttgaggctgtatcaagg
gacgcacatgtaatggtgcgcgtgaaaagtgtggataggcgtgaacgaggatggtatgat
gttattgttttgccaacacatgaatataaatggacttttaaagaaggcgaagttgcaatt
ttgtcgtccccccggcctggttcagctgcccaatcaagtagatctaataggaagaccgct
gcttcaaatgaagacgctgaagctgactgtggacggcttgtaggtacagtcagacgccat
acgcctattgatacgcgtgatcccattggagcaattatccatttttatgctggggattca
tttgattgtagcagcgagactaatgttctgaggaaactgcaacctggaagcacctggtat
ctaacgggtcttggttcccttgcaacaacacaaagggaatatgtagcattgcatgcactc
cgccgtcttaatgtgcagatgcaaaacgcaattcttcagccaagtccagagcacttccca
aaatatcaagagcagccgcctgctatgcctgactgtttcactccaagtttttctgatcat
atcaatcgtactttcaatgggcctcagctatcggcaattcattgggctgcaatgcacaca
gctgctggcacaagcaatggagtggttaagaaacaagaaccatggcctttcacgttagta
caaggtcctccggggacagggaaaacccatactgtgtggggaatgttaaatgttattcat
cttgttcagtatcaacactactatgctgctctgctaaagaaacttgctcctgaaagttac
aagcaagttggtagtaccactaacagcagctcggaggcttttgctgcggggtctattgat
gaagttttgcagagcatggatcagaaccttttccgcgctcttcccaagctttgccccaaa
ccacggatgcttgtgtgcgccccatcaaatgctgcaacagatgagctgctttctcgtgtt
cttgaccgaggtttcatagatggtgagatgaaggtttaccgccctgatgttgcccgtgtt
ggagttgacacacagtctcgtgcagcccaagctgtatcagttgagcgacggacggaacag
cttttaatgaagggccgtgatgaagtaattgggtggttacagcagctaaaaggccgtgag
cagcagttatcacaggagatagggcttctacagagggaacttaatatcgttgcagcagct
ggtagatcccatggttcagttggggtagatcctgatgtgcttgctcacagggatcgtaac
cgtgacattctgcttcaaaaacttgctgcctctgtagaaagcagggataaagtacttgta
gagatgtcaaggctgctgatattagaaagcaggttccgtgttggcagcaacttcaatctg
gaagatgctaggtctaatctagaagccagttttgccaacgaagcagaaattgtttttaca
acagtgtcaagcagcgggcgcagattattttctcgccttagtcatggtttcgatatggtt
gttattgatgaggctgctcaggccagtgaagtaggagtcctccctccacttgcacttggt
gccgctagatgtgtcttggtaggtgatccacagcagctccctgctactgttattagtaaa
gcggctggaactttactctatagcaggagcctttttgagaggtttcagcaggctggttgt
cctaccattttattgtcagtgcaatatcggatgcatccccagatccgagagtttccatca
cgatacttctatcaaggctgccttacagacagtgaaagtgttgtcaaactgcctgatgag
ttgtattacaaagatgcattaatggcaccttacattttttatgacatctcacatggtcgt
gagtctcatagaggtggatcatcttcataccagaatgttcatgaagctcagtttgcattg
cgtttatacgagcatcttcagaggcttgtgaaagttaatggtggtaagaaggcatctgtt
ggtataatcactccatataagttgcagttgaagtgtcttcagcgggaatttgaggaggtc
atgaataccgaggaagggaaagatatctacataaacacagtagatgcttttcaaggccag
gagcgtgatgtgattatcatgtcatgcgtgcgtgcttcaaaccatggcgtgggttttgtt
gcagatatacggcgcatgaatgttgctcttactcgagctaggagagctctatgggttgtt
ggtaatgccagtgctctcatgcagtcagaggactgggcggcgctggtagctgatgcaaag
gccaggaaatgtttcatggacttggatagcatccccaaggactttctggccatgaagatc
tcttccaacactccaggaaggaattcttcgaacaacccaaggaacttgaggactggtgga
ccaagacccaggcatctggacatgcttccggaccccaggattggcatgagggctgatgag
gatgagcgtcctaactctgttccaagaaatgctagttaccggaatttggatgacctggga
cgctctggtgatagatctagggaaagtttgcagtttggagtggccaagaggccgaattca
tccaatggttctcggagagaagtctga
DBGET
integrated database retrieval system
