KEGG   Triticum dicoccoides (wild emmer wheat): 119330747
Entry
119330747         CDS       T07278                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like isoform X1
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tdc03009]
    119330747
Ribosome biogenesis [BR:tdc03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    119330747
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_TEP1_C EIF3I Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_LRRK2 Beta-prop_RIG_1st WDR54 Beta-prop_VPS8 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 119330747
NCBI-ProteinID: XP_037459769
LinkDB
Position
7A:complement(552393494..552399896)
AA seq 418 aa
MAPPSQLVLAASSTDAGVAAWDLRTGAEAIRHRPCASRPRAIAAVAGRFLAAAQVAAGNS
APIHYYHWDKPQVAVKSFPAEPIRALIADPEGNYLIGGGVSGDIFFWEVASGELLVRWHA
HYRDVRCLALYDMLLVSASEDGNIKVWDLLTMLDEQSRFEAKTPYLYNFNQHTLPVTDIA
CFHGAIALSSSEDRTCKIWSLSEGRMLRSISFPAIIDSVEIDPRSHIFYAGGRDGKIYVT
AMGVDVSSQGRDDLSILGILDDHSKAVTSLTSSTDGLLLVSGSEDGNVRVWDTRSQQVTR
KFKHSQGPVTNVLIVTPKRLNLPPLQPLRKVCAASGEVEPRAVILPNPENDVHIAGNLSS
NLLEQLLDAQQQHGNSRLFDSGVSTLNGVPNQQGTEWRSKYLELQDLFVHEVLGDMPS
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggcgccgccgtcgcaactggtgcttgcggcctcctccaccgacgccggcgtggccgcg
tgggacctccgcacgggggccgaggccatccgccaccgcccctgcgcctcccggccacgt
gccatcgctgccgtcgccggccgcttcctcgccgccgcccaagtcgccgccggcaactcc
gcccccatccactactaccactgggacaagcctcaggtggctgtgaagagcttccccgcc
gagccaatccgcgcgctcattgctgatccagaggggaactatctcatcggcggcggtgtg
tccggtgacatattcttttgggaggtggctagtggagagctgcttgtccgatggcatgct
cactatcgtgatgttaggtgcctagccctgtatgacatgttgcttgtctcggcgtccgag
gatgggaacatcaaagtttgggatctgctcacgatgcttgatgagcaatcaaggtttgag
gcaaagacaccatacctatacaactttaatcagcacacacttcctgtaactgatattgct
tgttttcatggagcaattgctttgtcatcttcagaggatcgtacatgtaaaatatggagt
ctatcagagggcagaatgctgagaagtatttcatttcctgctatcattgattctgtcgaa
atagacccaagaagtcatattttctatgctggtggtagagatggaaagatatatgttact
gctatgggtgttgatgtctcctctcagggccgtgatgatttgtctattcttggtattctg
gatgaccacagcaaggcggtaacgagcttaacatcaagtacagatggccttctactagtc
tctggttcggaggatggtaatgttcgggtttgggataccagaagtcagcaagtaacccgg
aaattcaaacactcccaaggtccagtaactaatgttctcatagtaacacccaaaagatta
aatctgccacctttacaaccattgcgtaaagtgtgtgcagcgagtggcgaagttgaacca
cgggctgtaattctgcccaaccctgaaaatgatgttcatattgctggaaatctcagctct
aaccttctagagcagctcttggatgcacagcagcagcatggcaattctaggttatttgat
tctggggtgagcactctgaatggcgtaccaaaccaacagggtacagaatggagaagtaaa
tacctagagttgcaggatctctttgtgcatgaggttcttggtgatatgccatcttaa

DBGET integrated database retrieval system