Triticum dicoccoides (wild emmer wheat): 119330781
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Entry
119330781 CDS
T07278
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119330781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119330781
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119330781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
ATG17_like
Motif
Other DBs
NCBI-GeneID:
119330781
NCBI-ProteinID:
XP_037459812
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All DBs
Position
1B:260755471..260768017
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AA seq
947 aa
AA seq
DB search
MDSEDCLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRFFDRRDYYTAHGENATFIA
KAYYHTMTALRQLGVNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGSGSSWRLTK
SGTPGNIGSFEDILFANNDMQYSPVTVALFPVFREGQLYVALSFVDMTNRKLGLAEFPED
SRFTNVESALVALGCKECLLPADFEKSIDLQPLQDAISNCSILLTERKKAEFKSRDLVQD
LGRIIRGSVEPVRDLLSQFDYALGALGALVSYAELLADDTNYGNYTIEKFNLDRYMRLDS
AAVRALNIVEGKADVNKNFSLFGLMNRTCTAGMGKRLLNKWLKQPLIDVNEINNRLDMVQ
AFAEDPELCQGLRQQLKRISDIDRLTHALRKKSANLQPVVKLYQSCSRIPYIKGVLQQYN
GQFSTSVMTRFLSSLEEWLTENRYGRFANLVETAIDLGQVDNGEYRISPLYSSDLAVLKD
ELSEVENHINNLHMHTATDLDLSVDKQLKLEKGPFGHVFRISKKDEQKVRKKLTTNYIII
ETRKDGVKFTSAKLKKLGDQYQSLLGDYTSCQKKIVDNVVQVSCTFSEVFENFAAIISEL
DVLQSFADLAISCPVPYVRPDITTSEEGDIILQGSRHPCVEAQDGVSFIPNDCTLARGKS
WFQIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFAT
HFHELTALANKNGDQHQHVPDLGIANYHVGAHMDPSSRKLTMLYKVEPGSCDQSFGIHVA
EFANFPEAVIALAKSKAEELEDFTSAPNLSGEPSDEVGSKRKRVFSPDDVTRGAARARLL
LEDFAALPLDEVDGSKATEMVAKLKSDFEKDATSNPWLQQFLSGMDL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaagactgcttgccggaggggggaaagctcccggagctcaagttagatgcg
aggcaagcccagggtttcatctccttcttcaagaagttgccgaaggatcctcgggccatt
cgtttctttgatcgccgggattattacactgctcatggtgagaatgcaacctttattgca
aaggcatactatcacacaatgactgccttaaggcaactgggcgttaactctgatggaatc
tcaagtgtcagtgttagcagggctatgtttgagaccattgcacgcaaccttttgttagat
aggacggaccatacactggagctctatgagggaagtgggtcaagttggaggttaacaaaa
tctggaacgcctggaaacattggcagttttgaagatattctgtttgctaacaatgacatg
caatattctccggttactgttgcattgtttcctgtcttccgtgaaggtcagctatatgta
gcgcttagttttgtggatatgacgaaccggaagctggggttggctgagttccctgaagat
agtcgattcacaaatgtggaatcagcccttgttgcattaggttgcaaggagtgtcttctt
ccagcagattttgagaaatcaatagatttgcagcctcttcaggatgctattagcaattgc
agtattctattgactgaaagaaagaaggctgaatttaaatctagagatcttgtgcaggat
cttggtagaataatcaggggttctgtcgagccagttcgtgatctcctatctcagtttgac
tatgctttgggtgcccttggagctctagtatcatatgctgagttgctagcagatgacact
aattatggaaattacacgattgagaaattcaatttggaccgctacatgcgacttgattct
gctgcggtgcgagcattgaatattgttgaaggaaaagctgatgtaaacaagaattttagt
ttgtttggtttgatgaacagaacttgcactgctgggatgggaaagcgacttcttaacaaa
tggctgaaacaacctttgatagatgtaaacgaaatcaataacagattagatatggttcag
gctttcgcagaagatccagagctttgtcagggtcttaggcaacaacttaaaaggatatct
gatattgatcgcctaacacatgctctccgtaagaaatcagctaacctgcagcctgttgtt
aagctctaccagtcctgctctagaatcccgtacatcaagggtgttcttcaacaatacaat
ggccaattttctacatctgtaatgacaaggttccttagctctttagaagagtggctgaca
gagaatcgatatggcaggtttgctaatcttgttgagacagccattgacctcggtcaagta
gacaatggcgagtacaggatatctcccctatattcttctgatttggctgtgctgaaggat
gagctttctgaagtcgaaaatcacataaacaatttgcacatgcatacagccactgatctg
gatctttctgttgataagcaattgaagctagaaaaaggcccatttggacatgtgttcaga
atctcgaagaaagatgaacagaaagtcaggaaaaagctcacgaccaattacattatcata
gaaactcgtaaagatggtgtgaagtttacaagcgccaagcttaaaaagctaggtgaccaa
taccagtcactgcttggtgattacacaagttgccagaaaaagattgtcgataatgtagtg
caagtttcatgcaccttctcagaggtatttgagaattttgctgcaattatatccgagttg
gatgttttacagagttttgctgatttggcaataagttgcccagttccttatgtaagacca
gacatcacaacatcggaggaaggagatattattctacaaggtagtcggcatccttgtgtg
gaggcccaagatggtgttagcttcataccaaatgattgcactttggcgaggggaaaaagt
tggtttcaaatcatcactgggccaaacatgggtggaaaatccacttttatacgtcaggtt
ggcgtaaatgtcttgatggcacaagttggttcctttgttccttgtgatcaggcaagcatt
agtgtgagagattgtatttttgctcgtgttggcgctggtgattgccaactccgtggtgtt
tcaacctttatgcaagagatgcttgaaacagcatccattttgaaaggtgcatctgagaaa
tctctcataattatcgatgagttgggacgaggaacttccacatatgatggatttggtctt
gcatgggctatctgtgagcatcttgtggaagtgactagggcgcctacattgtttgcaact
cattttcatgaattaactgcattagcaaataaaaatggtgatcagcaccaacatgttcca
gatttgggaattgcaaattatcatgtgggtgcacatatggacccatcaagtcggaagttg
actatgctttataaggttgaacctggttcctgcgaccaaagttttggtatccatgttgcg
gaatttgctaattttccagaagctgtcattgctcttgcaaaaagcaaagctgaagagtta
gaagactttaccagtgcacctaacttgagtggtgaacccagtgacgaggttggatcgaaa
cgcaagagggtgtttagcccagatgatgtgacgaggggagctgctcgggctcgccttttg
ttggaggattttgctgcattgcctctagatgaggtggatgggagcaaggctacggagatg
gtggccaaactgaaatcagacttcgagaaagacgcaaccagtaatccctggctgcagcag
ttcctgagtggaatggatctctga
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