Triticum dicoccoides (wild emmer wheat): 119330957
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Entry
119330957 CDS
T07278
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119330957
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119330957
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119330957
NCBI-ProteinID:
XP_037460006
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Position
7A:549731198..549733127
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AA seq
444 aa
AA seq
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MEGFQWSRPVSLLLYAVFFLAAAAVSEANIGEFDEYWQRRQLEARARAEAAYHPNPIEVA
NSLNRAVHRAVREESGSRRKLLGLHKKFAGPCTATNPIDRCWRCRDDWATDRMRLARCAQ
GFGRHATGGLGGKIYIVTDGDDDDVLEPRPGTLRWAVIQNEPLWIIFARPMLIKLKEELL
VGSNKTIDGRGVQLRIADGAQVTVQYAHNVIIHNIHVNDLIVGKGGRIRDSPQHAGFRTQ
SDGDGVSVFGSTDVWLDHLSLATCQDGLIDVIDQSTGVTISNCHLTNHNDVMLFGSSDSN
PKDEIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTIISQGNR
YIAPPNLAAKLITKRLYAEESEWKNWVWHSEGDLMLNDAVFTDSGGPNQRKFEKDDLIPP
KPGSYVTRLTRFAGCLPCKPGKPC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggggttccagtggagcaggcccgtctccttgctcctgtatgccgtcttcttcctg
gcggcggcggccgtgtcggaggccaacatcggcgagttcgacgagtactggcagcggcgc
cagctggaggccagagcccgcgcggaggccgcctaccatcccaaccccatcgaggtcgcc
aacagcctgaaccgcgccgtccacagagccgttcgggaggagagcgggtcgaggaggaag
ttgctgggactgcacaagaagttcgctgggccgtgcacggcgacgaacccgatcgaccgg
tgctggcggtgccgcgacgactgggcgacggaccggatgcgtctggcgcggtgcgcgcag
gggttcgggaggcatgccacgggcgggctgggcgggaagatctacatcgtcacggacggc
gacgacgacgacgtgctggagccgcggccgggcacgctccggtgggccgtgatccagaat
gagcccctgtggatcatcttcgccaggcccatgctgatcaagctcaaggaggagctgttg
gtcggcagcaacaagaccatcgacgggcgcggcgtgcagctgcgcatcgccgatggcgcg
caggtgaccgtgcagtatgcgcacaacgtgatcatccacaacatccacgtcaacgacctc
atcgtgggcaagggcggcaggatccgggactcgccgcagcacgccgggttccgcacccag
tccgacggcgacggcgtgagcgtcttcggctccaccgacgtgtggctcgaccacctctcc
ctcgccacctgccaggacggcctcatcgacgtcatcgaccagtccaccggcgtcaccatc
tccaactgccacctcacaaaccacaacgacgtcatgctcttcggctccagcgacagcaac
cccaaggacgagatcatgcagatcaccgtcgccttcaaccacttcggaagagggctcgtg
cagagaatgccaaggtgccgatggggattcttccacgtggtgaacaacgactacacccac
tggctcatgtacgccatcggcggcagcaagaacccgaccatcatcagccaggggaaccgc
tacatcgcgccgccgaacctggcggcgaagctgatcacgaagcggctgtacgcggaggag
tcggagtggaagaactgggtgtggcactcggagggggacctgatgctcaacgacgccgtc
ttcaccgacagcggcggccccaaccagaggaagttcgagaaggacgacctcatcccgccc
aagccgggatcgtacgtcaccaggctcacacgcttcgccggctgcttgccgtgcaagccc
ggcaagccctgctaa
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