Triticum dicoccoides (wild emmer wheat): 119331440
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Entry
119331440 CDS
T07278
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119331440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119331440
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
119331440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
TMEM214
SOG2
Motif
Other DBs
NCBI-GeneID:
119331440
NCBI-ProteinID:
XP_037460496
LinkDB
All DBs
Position
1B:complement(285493275..285509174)
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AA seq
622 aa
AA seq
DB search
MLRKCYSTEPNPSPFHFANHPRRDPDPDRSTIRLRHLNPPSVPRRPLLIPAAMGSVDLVL
KSACEGCGSTSDLYGTGCKHTTLCSSCGKSMALSRARCLVCSAPITNLIREYNVRANAST
DKAFSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQLTDKMLEKYNRKPWILEDETGQY
QFQGHMEGSQSATATYYLLMLHGKEFHAFPAGSWYNFSKVAQYKQLTLEEAEEKMNKRKT
SATGYERWMMKAATNGPAAFGSDMMKLEPANDGEKESARHKKGKDNEEGGNSDKGEENEE
EEAGRKDRLGLSKRGMDDDEEGGKDLDFDLDDDIEKGDDWEHEETFTDDDEAVDIDPEER
ADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRSSGQNESDADDDDDEDDQDDE
SSPVLAPKQTDQPKDEPVDNSPAKPTPSSGHARSTPPASKSKQKRKSGGDDAKASSGAAS
KKAKVESDTKTSSIKEETPSSSKPTPKASASSRSANVSPVTEGEIRTVLLAMAPVTTQDL
VSRFKSRLRGPEEEAIAVNDLASRLGHSHKVHKSIVHRCMDAIRLPIHHLQDKNAFAEIL
KKISKIQKTNGHNYVVLREDKK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaaatgttattcaacagagccgaacccatctccatttcattttgcgaatcac
cctcggcgagacccggacccggaccggagcaccatccgtctccggcatcttaacccgccg
tccgtgccccgtcgcccactgctcatccccgccgcgatggggagcgtagacctggtgctg
aagtcagcgtgcgagggctgcggctccacgtcggacctctacggcactgggtgcaagcac
accacgctctgtagctcctgcggcaagtccatggcgctttcccgcgcccgatgtctcgtc
tgctctgcgcccatcacgaacctcatccgggaatacaatgtgcgggcaaatgccagcaca
gataaggcattctctattggaagatttgtaactggtttgccgccattctcaaagaaaaag
aatgctgagaacaaatggtctcttcataaagaaggcctgcaaggacggcagcttactgac
aaaatgctggagaaatacaacaggaagccatggattttggaagatgaaactggtcaatat
cagtttcaaggtcacatggagggatcacagtcagcaacagctacatactatttgttaatg
ttgcatggcaaggaatttcacgcatttcctgctggttcctggtataacttcagtaaagtt
gcgcagtacaagcagctgactctggaagaggccgaggagaagatgaacaagagaaagact
agtgcaactggttatgaacgttggatgatgaaagcagctacaaatgggccagctgccttt
ggttcagatatgatgaaacttgagcctgctaacgatggggaaaaagaaagtgctcgtcat
aagaaggggaaagataatgaggagggtggtaattctgataaaggtgaggagaatgaagaa
gaggaagccggtcgtaaagataggctcgggctctctaaaaggggcatggatgacgatgag
gaaggtggaaaagatctagattttgatttggatgatgacattgagaaaggtgatgactgg
gaacatgaagaaacattcaccgatgatgacgaggctgtggatatcgacccagaggagcgg
gcagatttagctcctgaaattcctgctccacctgaaattaagcaggatgatgaagagaat
gaggaagaaggtggcctgagcaagtcaggaaaggaattaaagaagctgcttggtcgttct
tctggacaaaatgagtcggatgccgatgatgatgatgatgaagatgatcaggatgatgag
tcatctccagtgcttgctccaaagcagacggatcaaccaaaagatgaacctgttgataac
agcccagccaaacctacaccttcatcaggacatgctcgtagcacacctcctgcatcgaaa
tccaagcaaaagaggaaatctggtggtgatgatgccaaagcatctagcggtgctgcttca
aagaaagcaaaggtggaatctgatacaaaaacatcaagtatcaaagaggagacaccatct
tcctcaaaacctacaccgaaggcctctgcttcatcaagaagtgccaatgtatctcctgtg
acagagggtgagatcaggactgttcttcttgcaatggctcctgtcactacacaagattta
gtctccagatttaagtctagactacgaggtccagaggaagaagctattgctgttaatgac
ttggcatccaggcttggacacagtcacaaagtccacaagagtatcgtgcatcggtgcatg
gacgctatcaggctccccatccaccaccttcaggacaagaacgcctttgctgaaattctg
aagaaaatttcgaagatacagaagactaatggccacaactatgttgtccttagagaggat
aagaaatga
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