Triticum dicoccoides (wild emmer wheat): 119331489
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Entry
119331489 CDS
T07278
Name
(RefSeq) formamidopyrimidine-DNA glycosylase-like
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119331489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119331489
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
119331489
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
119331489
DNA repair and recombination proteins [BR:
tdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119331489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
119331489
NCBI-ProteinID:
XP_037460543
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Position
7A:712902523..712906060
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AA seq
408 aa
AA seq
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MPELPEVEAARRALEAHCVGRRITRCAVADDSKVVVAAAGRVAFERAMVGRTIVAARRRG
KNLWLRLDAPPFPSFQFGMAGAIYIKGVAVTKYKRSAVNSEDEWPSKYSKFFVELDDGLE
FSFTDKRRFARVRLFDDPETVPPISELGPDALFEPMSVDNFVDSLSRKKIGIKALLLDQS
FISGIGNWIADEVLYQSKIHPLQIASSLTRESCEALHQSIQEVVKYAVDVDADCDRFPVE
WLFHHRWGKKPGKVDGKKIEFITAGGRTTAYVPQLQKLTGTQSNKKVVSSPGQVSEDGDA
KEAGTEVEVEADDDLKPRKRVATFKAAKGEQNKDVISAPSKIRRKIAGGKKKQSIEHGSK
DDVKTTGPNKAGAGSNDEHGLDEPAAKMRKVSGQGTRNSSKNKPKTTK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttccggaggtggaggcggcgcggagggcgctggaggcgcactgcgtgggc
cgccgcatcacgcgctgcgccgtcgcggacgactccaaggtcgtcgtcgccgccgccggg
cgcgtggccttcgagcgcgctatggtgggcaggaccatcgtggccgcgcgccggaggggc
aagaacctctggctccgcctcgacgccccgcccttcccctccttccagttcggaatggca
ggtgcgatctacataaagggcgttgccgtcacaaagtacaagagatcagctgtcaactct
gaggacgagtggccctccaagtactccaaattcttcgtcgagcttgatgatggcttggag
ttttccttcactgataagaggcgctttgcaagagttcggttatttgatgatcctgaaact
gtacctccaatttctgagttaggtccagatgcgctctttgagccgatgtctgttgataat
tttgtggactcactgagcaggaagaagattggaataaaagctcttttacttgatcagagc
ttcatatcaggcattggtaattggattgcagatgaggtgctttaccagtcgaaaatccat
ccattgcagattgcttctagcctaacaagggagagttgtgaagcgctacatcaaagcatc
caagaagttgtgaaatatgctgtcgatgttgatgctgattgtgatcgctttcctgtggaa
tggttgtttcatcaccgctggggcaagaagcctggtaaagtcgatggaaagaaaattgaa
ttcataacagctggtggcaggactacagcctatgtgccacaactgcagaagctgactggg
acccaatctaacaaaaaagtagtgtctagcccagggcaagtgagcgaggatggtgatgcc
aaggaagcagggacagaagtagaagtggaagctgatgatgatttgaagccaagaaagaga
gtggcaacattcaaggctgccaagggagagcaaaacaaggatgtcataagtgccccttcc
aaaataagaaggaaaattgctggcggcaagaagaaacaaagcattgaacatggcagcaaa
gatgatgtcaagactacaggaccaaacaaagctggtgctggtagcaacgatgagcatggt
ttggacgaacctgctgctaagatgcgcaaggtatcaggccaaggtacaagaaattcgtcc
aagaataaaccgaagactaccaaataa
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