Triticum dicoccoides (wild emmer wheat): 119334413
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Entry
119334413 CDS
T07278
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119334413
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119334413
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
119334413
NCBI-ProteinID:
XP_037462885
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Position
7A:298218510..298222889
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AA seq
669 aa
AA seq
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MAKLSCRSLVRCCLGPPREGEAGDAMDGVKLKVASRYVIIKNDVFELTLSNPDGIVTGVR
YNGVDNLMEILNKEDNRGYWDIVWNSPGQRTGIFDVIKGTEFRIIHHDENQAEVSFTRSW
DPSQEGKAVPLIIDKRFIVLRGSSGFYTYGIYEHKEGWPDFGIGETRVAFKLRKDKFQYM
AMADNRQRIMPMPDDRLPPRGQQLAYPEAVLLVDPINPKLRGEVDDKYQYSCEDRYNSVH
GWVSSDPPIGFWQITPSDEFRTGGPLKQNLTSHVGPTMLAMFLSAHYAGDDLSPKFTNGE
YWKKVHGPVFMYLNSSQDGSDPSLLWEDAKVQVMMEKQSWPYDFALSEDFQKTEQRGCIS
GRLLVRDRYIIEDEDLYAASAYVGLALPGEAGSWQRECKGYQFWCQADADGSFYIKNIVT
GNYNLYAWVPGFIGDYRFDATLTISSGDDIYLGDLVFEPPRDGPTMWEIGIPDRSAAEFY
VPDPNPNYVNRLFINHPDRFRQYGLWERYAELYPDRDLVYTIGESNYSTDWFYAQVTRRS
DGDTYQPTTWQIRFSLDAVPPNSTYKFRVALASSANAELQVRFNDEARAVPHFTTGLIGR
DNAIARHGIHGLYWLFNVGVSGAWLVRGINTIYLKQPRNQSPFQGVMYDYLRLEGPCVVP
AANSGPKAN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacttagctgcaggagcctggtgcgctgttgtttgggccctccacgggaaggg
gaagccggcgacgccatggacggtgttaagctcaaggtcgccagcagatacgttataatt
aaaaatgacgtattcgagctgacgctgtccaaccccgacggtattgtaactggcgtgcgc
tacaacggtgtggacaatcttatggagattcttaacaaagaagacaaccgagggtactgg
gacattgtttggaattcaccaggacagcgaactggaatatttgatgtgatcaaaggcaca
gagttccgcatcatacatcatgatgaaaaccaggctgaggtctccttcaccagatcatgg
gatccttcgcaggaagggaaagctgttccgctcatcatcgacaagaggttcatcgtgctt
cgcggctcctcgggattctacacctacggaatctatgagcacaaggaagggtggcctgat
tttggcattggggagaccagagtggccttcaaacttagaaaagacaagttccagtacatg
gcaatggctgacaacaggcagagaataatgccgatgcctgatgaccggttgcctccccgc
ggccagcaattagcataccctgaggctgtcctgcttgtggacccaattaatcctaaactc
agaggggaggtcgacgacaagtaccaatactcgtgtgaagaccgatacaatagtgtccat
ggatgggtgtcatctgatcctccgattggcttctggcaaatcacgcccagcgacgagttc
cgtactggaggacctctgaagcagaacttgacatctcatgtcgggcccactatgctcgct
atgtttcttagcgctcattatgctggagatgacctttcgcccaagttcacgaatggagaa
tattggaaaaaggttcatggaccggtgttcatgtaccttaactccagtcaggacggatca
gacccaagtctactatgggaggatgcaaaagttcaggtgatgatggagaaacagagctgg
ccctatgattttgcactttcagaggatttccagaagactgagcaaagaggttgtatctct
ggtagattgcttgtaagagacaggtatattatagaggatgaggatctttatgccgcatca
gcctatgtaggcttagcattaccaggagaggctggatcgtggcaaagagagtgcaagggg
taccaattctggtgtcaagcagatgcagatggtagcttctacataaagaacattgtaact
ggaaactacaacctatatgcgtgggttccgggtttcatcggggactacagattcgacgcc
acactaacaatttcttcaggggacgatatctatctgggtgacctcgtgttcgagccaccg
agagacggccctaccatgtgggagatcggaatacccgataggtctgctgccgagttctac
gttccagaccccaaccccaactatgtcaacagactcttcatcaatcatcctgacaggttc
aggcagtatgggctttgggagagatacgcagagctgtatccggaccgtgatctggtgtac
accatcggcgaaagcaactacagcactgattggttctacgctcaagttaccagaagaagt
gatggggatacgtaccagcccaccacatggcagataaggttcagcctcgacgccgtccct
cccaacagcacgtacaagttccgggtggcgctcgcgtcttcagccaacgctgaactgcag
gtccgtttcaacgacgaggcacgggctgtgcctcacttcaccacggggctcatcgggcgc
gacaacgcgatcgcgaggcacgggatccatggcctctactggctcttcaacgtgggtgtg
agtggagcctggcttgtccgagggatcaacaccatctatctgaagcagcccaggaaccag
agcccgttccagggggtcatgtacgactacctgcgtctggaaggaccctgtgttgtgcct
gccgctaactcaggcccaaaagctaattga
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