Triticum dicoccoides (wild emmer wheat): 119334445
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Entry
119334445 CDS
T07278
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdc01002
]
119334445
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119334445
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119334445
Peptidases and inhibitors [BR:
tdc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119334445
Ubiquitin system [BR:
tdc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119334445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
119334445
NCBI-ProteinID:
XP_037462904
LinkDB
All DBs
Position
7A:699446767..699454536
Genome browser
AA seq
1060 aa
AA seq
DB search
MPGGGIGGGGPGFDFDFDFPAVIQAALVGFVLLAAAAAALRRAASRYFLVDAAGFAAAYE
DHHHHIAPAYAMPPQGDQQPPPSSPLGQGGQLQAAAPELGPCAQCGAAGTKKCSGCKRMR
YCSGECQSKHWQSDHKFKCKQMKLLDPIDKLPCGVEANSKKSPVSGHRGISLVPGHRKLN
KVIYPYDDFLKLYNWKCNDSKYSDFLTCGLVNCGNSCFANVVLQCLSYTRPLVAYLLGKD
HYRQCAIRHEDWCFLCELQSHIQRAFDSVHPFAPTNILSHLPNIGGNLGFGRQEDAHEFM
RFAIDKMQSACLDEFGGEKVVDHSTQETTVIQHIFGGRLQSQVQCTACGMVSNRYENMMD
LTVEIHGDAESLEKCLDQFTAIEWLDGDNKYKCDGCNDYVKARKHLTVHQAPNILTITLK
RFQSGRFGKLNKKVTFPTKLDLTPYMSTTDGTDQYDLYAVVVHLDMLNASFFGHYICYIK
HYRGRWLKLDDCKGMAVDEEEVHAQGAYMLLYSRRTARPVPLLPVKEPIKHEKQCKVPPL
NGQNHLIPEDVSLKCESLSKPSEDLREDSESSNDSLHRMDTVDQVSDLDLHMNIERDKFV
TNESIHQPISSALHVLEEDTRDSGSLLEGNNTMRADQFGNSACESSSVNSSEEECKEPAP
GIDSVDYMDIDMEAGTEVETQNVQQQPILGDSVGVIGNKTSVPTFENCMAGKPKPLFSIG
FLDKPSRKKSDSREECQNGGSMAVSSQKIDGHCNEHLSRPEQGLIANSLGGSPSSANGSV
HCNGDVFVTPSNGVLVNGDTQSDNYSLDAAKRDVPSVRGFNPRPYRSPSSSNPNRNNTSK
GEMSFFPRGFLAKPRSGEKAVKVNDGLPFSNGNGKPSSSSSVNGNGISNTNSSPRSTTGG
MGMSPGFLAKRSRESAAASFMGDLQSSNSSREQEHVGAAALLPDKIQERRSSYCTTNGID
AQHGAASVHDVSGHSDENGHAFVGTKKGIHGEKNGSNGTLDMHDSSCQMDENGHGVLDIK
DVVFREQNVSNGTLDTHGMGSEDADHVVKSPAAPAHDGLR
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgccggggggcgggatcggcgggggcggcccaggcttcgacttcgacttcgacttcccg
gcggtgatccaggcggcgctcgtcggcttcgtgctcctcgccgccgcggccgccgcgctc
cgccgcgccgcctcgcgctacttcctcgtcgacgccgcgggcttcgccgccgcctacgag
gaccaccaccaccacatcgcgcccgcctacgcgatgccgccccagggggatcagcagccg
cccccctcctcgccgctggggcagggggggcagctgcaggccgccgcgcccgagctcggg
ccctgcgcccagtgcggcgccgccggcaccaagaagtgctccggctgcaagcgcatgcga
tactgttctggagaatgtcagtcaaagcattggcaatctgatcacaaattcaagtgcaaa
caaatgaaattattggatcctattgacaagttaccctgtggagttgaggccaacagtaag
aagtcacctgtctctggccatcgtggtatctcattagtgcctggccatcgaaaattaaac
aaggtcatctatccttatgatgattttttaaagctgtacaattggaagtgcaatgattcg
aaatacagcgattttttaacttgtgggcttgtgaactgtggcaacagttgctttgccaat
gtggttttacaatgtctgtcatacacaaggccacttgtggcctatctattaggaaaggac
cattataggcaatgtgctataagacatgaagattggtgtttcttatgtgagctgcaatct
catattcaaagagcgtttgatagtgtacacccatttgctcccacgaacattctttctcat
ttaccaaatattggtggcaaccttggctttggtaggcaggaagatgctcatgaatttatg
aggtttgcaatagataagatgcaatcagcttgccttgacgaatttggaggtgagaaggtc
gtagatcatagcacccaggagacaactgttattcagcacatatttggcggtcgtctgcaa
tctcaggttcagtgtactgcatgtggtatggtctcaaatcgctatgagaatatgatggac
ttgacagttgaaattcatggtgatgctgaatccttggaaaaatgcttggatcagttcact
gctatagagtggcttgatggggacaataagtacaaatgtgatggatgtaatgactatgtt
aaagcacggaaacatctcacagttcatcaagctccaaatatactcactattactctcaaa
agattccagagtggtagatttggaaaactgaacaagaaagtcacattccctacgaagtta
gatttaactccatacatgagcaccactgatggaactgaccagtatgatctatatgctgtc
gttgttcatctggatatgctgaatgcttcgttttttgggcattatatatgctacataaaa
cattatcgaggacgttggcttaaattggatgactgcaaggggatggctgttgacgaggag
gaagtacatgctcaaggtgcctatatgcttctatatagcaggagaacagctcgtcctgta
ccacttcttccagtcaaagaaccaataaaacatgagaaacagtgcaaagtgcctccttta
aatggacaaaatcatttgatacctgaggatgtgtcattaaaatgtgaatcattgtcaaag
ccttcagaggatctacgagaagattctgaatccagcaatgactctctgcatagaatggat
accgtcgaccaggtatcagacctggatttgcatatgaacattgagagagacaaattcgtt
accaatgaaagtatacatcagccaatttcatcggcattacatgtccttgaagaagatact
agagactcaggttctctgttagaaggcaacaataccatgagagctgaccaatttggcaat
tctgcatgtgaatcctcttcagttaattcctctgaagaggaatgcaaggaacctgcccca
ggtattgattcagttgactacatggatattgatatggaagctggaacagaagttgaaaca
cagaatgtgcaacaacaacctatcttaggtgattcagttggagtgataggcaacaaaaca
tcagtcccaacctttgagaattgtatggcaggaaaaccaaaaccactcttttctattggt
ttccttgacaaaccctcaagaaagaagtccgactctagggaagagtgtcaaaatggtggc
agcatggcagtttcctcccaaaaaatagatggtcattgtaatgaacatctcagcaggcca
gagcaaggacttattgccaactcccttggcggcagcccatcctcagcaaatggaagtgta
cattgcaatggggacgtgtttgtgactcctagcaacggagttcttgtcaatggtgataca
caatccgacaattattccttggatgcagcaaagagagatgtaccttctgttaggggattt
aatccaaggccttacagatcaccatcaagcagcaacccaaatcggaataatacaagcaaa
ggggaaatgtcattcttcccacgtggtttccttgcaaagcctcgttctggagagaaagca
gtcaaagttaatgatgggttgccatttagtaatggaaatggcaaaccatcatcatcatcc
tctgtgaatggcaacggcatatcaaataccaattcttcacctcgaagcaccacaggtggc
atgggcatgtctcctggattccttgcgaagcgttccagggagtctgcagctgcaagcttt
atgggtgatctgcagagcagtaactcttccagggagcaagaacatgttggtgctgcagca
ctactacctgacaagatacaagaaaggcggagttcctattgcaccacaaatggcattgat
gcccaacacggagcagcttccgttcatgatgtgagtggtcacagtgatgaaaacgggcac
gcattcgtgggcaccaagaagggcatccatggtgaaaaaaatggtagcaatggaaccctt
gatatgcatgacagcagttgccaaatggatgaaaacggacatggagttctggatatcaaa
gatgtcgtcttcagagaacaaaatgtcagcaatggaactctcgatacgcatggcatgggg
tccgaagatgctgaccacgtcgtcaagtcacccgccgctcctgcccatgacggtctgcga
tga
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