Triticum dicoccoides (wild emmer wheat): 119334741
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Entry
119334741 CDS
T07278
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119334741
04120 Ubiquitin mediated proteolysis
119334741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119334741
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119334741
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119334741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
Integrase_2
Lyase_catalyt
Motif
Other DBs
NCBI-GeneID:
119334741
NCBI-ProteinID:
XP_037463185
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All DBs
Position
7A:complement(296927002..296930716)
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AA seq
215 aa
AA seq
DB search
MLAMGIRVSSAQPLYFYQVYSPLCMCICCWPNCIHFVGVMIRPLKIYIVSCCARCLRFGF
KNKLFLTEGQWEKKAVYTFYLELICDLAHLSLYMLFFIDIFLNHGVPLHLIRELYETLHN
FKIRVSDYVHHRKITSTMNGRFPDATADELNVSDVTCIICREEMTTAKKLLCGHLFHVHC
LRSWRERQHTFPTCRSPIAPRTMDVIHQCDNMKLN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaatgggtataagggtatccagtgcccaacctttatatttttatcaggtgtat
tcaccactatgcatgtgtatatgttgttggcctaactgtatacattttgttggtgtgatg
attcgtcctctaaaaatttacattgtgtcctgttgtgctagatgtttgaggtttggcttt
aaaaataagctatttctaacggaaggtcaatgggagaaaaaggcagtgtatacattttat
ttggagcttatctgtgaccttgcgcacttatctttatatatgctcttcttcatagatatc
ttcctgaaccatggtgtcccactgcacttgatccgtgagctgtatgagaccttgcacaac
ttcaaaattcgtgtttcagattatgtgcaccatagaaagataacttccaccatgaatgga
cgctttccagatgctacagcagatgagcttaatgtgagtgatgttacatgtattatctgt
cgtgaagagatgacaacagcaaagaagctgctttgtgggcacttgtttcatgtgcattgt
ctgaggtcatggcgagagcgccaacatactttccccacatgtagatctcccattgccccc
cggacaatggacgtgatccatcagtgcgacaacatgaagctcaactag
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