Triticum dicoccoides (wild emmer wheat): 119335354
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Entry
119335354 CDS
T07278
Name
(RefSeq) protein CCA1-like
KO
K12133
MYB-related transcription factor LHY
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
119335354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdc03000
]
119335354
Transcription factors [BR:
tdc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
119335354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
CFAP90
Motif
Other DBs
NCBI-GeneID:
119335354
NCBI-ProteinID:
XP_037463384
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All DBs
Position
7B:complement(333461820..333473776)
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AA seq
711 aa
AA seq
DB search
MEINSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQ
IRSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNCPYPRKGCLSSETPTREVP
KSSVSLSNSNAEMASNGTLQLTCIQKLQRKELSENGSCSEVINIFREAPSASFSSSNKSS
SNHGVSGGIEPTKTENKDIATMERKSTSIDVGKDVKDINDQEMERNNRVHISSNYGRSHE
DCLDNSMKHMQLKPNTAETTYTGQHAASAPLYQMNKTGATGAPDPGTEGSHPDQTSDQAG
GANGSMDCIHPTLPVDPKIGSSSTAQPFPHNYAGFAPTMQCHCNQDANRSSLNMSSTFSN
MLVSTLLSNPTVHAAARLAASYWPAADSNIPVGPNQEVFAENAQGRHIGSPPSMASVVAA
TVAAASAWWATQGLLPLFAPPMAFPFVPVPTASFPIADVQRATENCPVDNAPKECQVAQE
QGQPEAMIVGASSGSDESGKGEVSPHTDKVETTPPTGAETSDAFGNKKKQDRSSCGSNTP
SSSDVEAEHVPENQDQANDKTQQACCSNSSAGDMNHRRFRNISSTNDSWKEVSEEGRMAF
DKLFSRGKLPQSFSPPQAEGLKVVPRGEQDEATTVTVDLNKSAAVIDHELDTLVGPRAAT
FPIELSHLNMKSRRTGFKPYKRCSVEAKENRVPAADEVGTKRIRLDSEPST
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggagataaattcttcgggtgaggaaacggtcataaaggtgcgaaagccgtacacaata
acaaagcagcgggagcggtggaccgaggcagagcacaaacggttccttgaagccctcaaa
ctgtatggcagagcttggcagcgcatagaagagcacgttgggacaaagacggccgtgcaa
atcagaagccatgctcagaagttcttcaccaagttggaaaaggaagctatcaataatggt
acttctccgggacaagctcatgatatagacatacctccaccacggcctaaaagaaaacct
aactgtccatatcctcgaaaaggttgtctcagttctgaaacacccaccagagaagttcca
aaatcaagtgtaagcttgagcaatagcaatgcagaaatggcgagcaatggaactcttcag
ctcacctgcattcagaaacttcaaaggaaggagttatctgaaaacggcagttgctcagaa
gttattaatatctttcgagaagcaccatctgcctcattttcttcctctaacaagagctct
tcaaatcatggtgtctcggggggaattgaaccgactaaaacagaaaacaaagatattgca
accatggaaaggaaatctacttccattgatgtggggaaggatgtaaaagatattaatgac
caggaaatggaaaggaacaacagagtccacatcagttctaattatggccgttctcatgaa
gattgtttggataactcgatgaaacacatgcagttgaagccaaatactgcggagacaaca
tacacgggtcaacatgctgcaagtgccccactctaccaaatgaataagactggggcaact
ggcgctccagaccctggaactgaaggaagtcatcctgatcaaacaagtgatcaagcggga
ggagctaatggaagcatggactgcatccatccaacacttccggtggatccaaaaattggc
agcagctccacagcacagccctttccccacaactatgcaggctttgcaccaacgatgcaa
tgccactgcaaccaagatgccaacaggtcttctcttaatatgtcatccaccttctccaac
atgctcgtttccacgttgttatcaaaccccacagtacatgcagccgcaaggcttgcagca
tcatactggccagcagcagacagcaacattcctgttggtccaaatcaagaagtttttgct
gagaatgctcaaggaagacatattggttctcctccaagcatggcttctgtggtagcagct
acagttgctgcggcttcggcatggtgggcaacacaaggtcttctccctctttttgctccc
cccatggcttttccatttgtaccagttcctactgcttcctttcccatagcggatgttcag
cgagctacagagaactgcccagtggacaacgcaccgaaggaatgccaagtagctcaggag
caaggtcaacctgaagctatgatagttggtgcatcttctggatcagacgagagtggaaaa
ggagaggtgtctccccacactgataaagttgagacaacacctcccacaggagctgaaaca
agtgatgctttcggcaacaagaagaagcaggatcgctcttcatgtggttccaacacgcca
tcaagtagtgatgtagaggcagaacatgttcctgagaaccaagatcaagccaacgacaag
acacagcaagcatgttgcagtaattcttcagctggtgacatgaaccaccgcaggtttagg
aacatttcaagcacaaatgattcatggaaggaagtttccgaagagggtcgtatggctttc
gataaactgttcagtagaggaaagcttccccaaagcttttctcctccacaagcagaagga
ttgaaggtggtacccaggggggaacaagacgaagctactacggtgacggtcgacctcaac
aagagtgctgcagttatagaccatgaacttgatacattggttgggccaagagctgctacc
tttcccattgaattgtcacacctgaatatgaaatcccgccggacaggcttcaaaccttac
aagaggtgctcggtggaagcaaaggagaatagggtgccggctgctgacgaggttggtacc
aagaggattcgccttgacagcgaaccctccacgtga
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