Triticum dicoccoides (wild emmer wheat): 119336857
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Entry
119336857 CDS
T07278
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119336857
Transcription machinery [BR:
tdc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
119336857
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_28
HTH_29
CH
Motif
Other DBs
NCBI-GeneID:
119336857
NCBI-ProteinID:
XP_037464835
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Position
7B:320945894..320949250
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AA seq
511 aa
AA seq
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MTATPALIGLSAGNRLLSTSFGPPNDLLSDKVNCHMSSAAGDAHGSSSLQFAPPAASKLT
VAAHRLKLSPHGRAQVMRALRQSAPALAPQPPPLLPADEFSLDAIILLQRSMLEKQWQLP
FEEEEDDDGGGDGHHVEAIGSAEDDDGKGRSSSVVVARSGVSARQRRMSGRRRGRSKKGS
GAVHLIISPELLQSRNRIYLRGTVSKELLTHKQVVHLSKKIKDGIWLQQQRSKLKEKLGN
EPSYKQMAQSLRISTPELRSRMRESFLAREVLTMSNIRLVISIAQKYDKLGVELSDLIQG
GLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRALADNSKTFRLPTYLHERLIAIRGAK
YALEDQGVSPTTQNIAKLLNISEKKVHNAAEAVNKALSLDQQAFPSLNGLPGDTLHSYIE
DQNVANDPWHGFEEWYLKEEVNKLLNSNLTERERDIIQLYHGIGKQCHTWEDISRQFGLS
RERVRQLGLIAMEKLKHAARQKKLDALLQDY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacgcctgccttgatcgggctgagcgcaggcaaccgccttctcagcacgtcc
ttcgggccgcccaacgacctgctctccgacaaggtcaactgccacatgagcagcgcggcg
ggagacgcccacggctcctcctcgctgcagttcgcgccaccggccgcgtccaagctcacc
gtcgccgcgcacaggctcaagctctccccacatggccgcgcgcaggtcatgcgggccctc
aggcagagcgcgcctgcgctcgcgccgcagcctcctccgttgttgcccgccgacgagttc
tccctcgatgccattatcctactgcagaggtccatgctcgagaagcagtggcaactcccc
ttcgaggaggaggaggacgacgacggcggcggcgatggccaccatgtggaggccattggt
tcggccgaggacgatgacggcaagggcaggagcagctccgtcgtcgtggcgcgctccggc
gtctcggcgaggcagcggcggatgagcggccggaggcgtgggaggtccaagaaaggcagc
ggcgccgtgcacctgatcatcagccccgagctgctgcagagcagaaaccgcatctacctt
cgcggtaccgtcagcaaggagctcctcacgcacaagcaggttgtccacctctccaagaag
atcaaggacgggatatggctgcagcagcaaagatcaaagctgaaagaaaaactggggaat
gagccgtcgtacaagcagatggcgcaatcacttcggatatcgacgccggagctacggtca
agaatgcgcgagtcgttcctcgcgagggaggtgctaacaatgagcaacatccgtttggtc
atatccatcgcccagaagtatgacaagctgggggttgagctgtccgacctgattcagggt
ggtctcatagggctactccgcgggatcgaaaagttcgatgcatccaggggcttcagaatt
tccacttatgtatactggtggattcgtcagggtgtttcaagagcactggccgacaactcg
aaaacattcaggctccctacttacctgcatgagaggctgattgcgattcgtggcgcaaag
tacgcattggaggaccaaggggtttctccgacaacgcaaaacatcgcaaagttgctcaat
atatcggagaagaaagtgcacaatgctgcagaggctgtcaataaggctctttcgttggat
caacaggcattcccctccttaaatggcctacccggagatacactccacagctatatagag
gatcaaaatgttgcgaatgacccatggcatggatttgaggagtggtacctaaaggaggaa
gtcaacaaacttctaaactcaaatctcactgaacgtgagagggacattattcagttatac
catggtatagggaaacaatgccatacatgggaggatattagcagacagttcgggttatcc
agggagagggtgaggcaactagggcttatcgcaatggagaagctgaagcacgccgcgagg
cagaaaaagctggatgcgttgctccaggattactga
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