Triticum dicoccoides (wild emmer wheat): 119337031
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Entry
119337031 CDS
T07278
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119337031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119337031
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119337031
mRNA degradation factors
5'-3' decay
Decapping complex
119337031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
DUF445
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
119337031
NCBI-ProteinID:
XP_037465029
LinkDB
All DBs
Position
7B:162676209..162684765
Genome browser
AA seq
1308 aa
AA seq
DB search
MASPSGNPNPNPNVPFELSRLFKPPPNPNHLTTVPTPTGIFPGAPPGAPMATGPPGPYSY
PPATPPFHRNPYLNYPTDPNAVHLPVAAFANPNPAANPIPNHSPGPNPGARLMQLLGNTA
PTHLESVVSMPPTSSEFSGGPVAPLPAMPSAPPARMTSTSSKMPRGRLLGPGDRAVHDVD
SRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALRSL
LRGHTQRVTDMAFFAEDVHRLASASVDGRIYVWKIDEGPDEENKPQITGKIEMAIQIVGD
AGTYHPRICWHSHKQEILFVGIGNCVLKIDTTKVGRGRDFSKEEPLKCSLDKLIDGVHLV
GKHDGDVTDLSLSQWMTTRLASASKDGTVKIWDDRRTVPLSVMKPHDGKAVYSVSFLTAP
EQPNHINLVTAGPLNREVKIWASSDKEGWLLPSESETWRCTQTLELVSSLENRFEEAFFN
QVAVLPQASLILLANAKKNAIYAIHVEYGPDPASTRLDYIADFTVAMPILSLTGTHESQP
DGEHVVQVYCVQTMAIQQYGLELSLCLPPTADNAGLGRDLAISHVYERPLEVASVEPSTE
TKPLSDHQGTEADTATHVSSPTPSSNLDNAGSYAEAVLRRDASRGPSLGDHDGDKSSFDY
SKKRMDSDGTSGQGAFDRKDCFGNEEPRGGHVDGTVSDPHPTFKVGVNATHLITPSEIIS
GVLPSAESTANGSPQNVEMESKLVVEEKADQNIGFEDVKETQIVQEKMERVNMSSEQTVQ
TISERSVTTDKYSVEDSQRSDPTLLKQHSGARDENLPRRTAEATENINGSSSRNLQLPSA
TKEEKVLHPQVSGQMSPITSTFNSTDSSHEHPSNTNPAIDSVPQVAAIQGTLQQLMAMHT
DMQKQLNAIVSAPIAKEGKRIETSLGRNIEKSIKANVDAMWARIQEENARHEKVERERMQ
QISTLITTSVNKDIPAILEKSLKREISLLGPTIARTTTPIIEKSLSSAVSDSLQKVLGEK
VANQLDKSISTKLEATVAKQIQTQFHTSAKQALQDALRSSFESSIIPAFEQSCKTMFEQV
DGAFQKGMSEHGTAIQQQVAAAHSPLAQTLRETINSASSITQGLTSELLDGQRKLLALVA
SGNPISHNTSALQPINGPIPNLPEADVPLDPMKELTRLLSEQKFDEAFTMALQRSDVSMV
SWLCSQVDLQGLCRLNPVPLNQGVLLALFQQLACDITNDTPLKLQWMTAVAMAIQPTHQM
IAAHVRPIFEQVYGVLARQQSVPGTTPLEANNIRLMMHVINSVMMTHK
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccctccggaaaccctaatcccaaccccaacgtccccttcgagctcagcagg
ctcttcaagcctcccccaaaccctaaccacctcacaaccgtgccgacccccactggcatc
ttcccgggcgccccgcccggcgcgccgatggccaccgggccgccgggcccctactcctac
ccgcccgccaccccgcccttccaccgcaacccgtacctcaattaccccaccgaccccaac
gccgtccacctccccgtcgccgccttcgcgaaccctaaccccgccgcaaaccctatccct
aaccacagccccgggcccaatccgggagctcggctcatgcagctgctgggcaacaccgcg
cccacccatctcgagtccgtggtgtccatgccgcctacgtcatcggagttctctggcggc
ccggtggcgccgctgccagcgatgccgtcagcaccgccggcgaggatgacaagcacaagc
agcaagatgccccggggcaggctgctgggaccgggggacagggccgtgcacgacgtggac
tcgcggctgccaggggaggcgcagccaccacagctggaagtgacgcccatcaccaagtac
acctcggacccggggttggtgctgggccggcagatcgctgtaaaccgaacgtacatcgtg
tacggcctcaagcttggcaacatccgcgtgctcaacatcaacaccgcactccgctcgctc
cttcgtgggcacacacagagggtgacggacatggctttctttgcagaagatgtccatcgt
ttagcaagtgcaagcgtagatgggcgtatatatgtatggaagattgacgagggacccgat
gaggaaaataaaccacaaatcacaggaaagattgaaatggccatccagatagtaggagat
gctggaacttaccatccaagaatatgttggcactcccataagcaagaaattctgtttgtt
ggaatagggaactgtgtcttaaaaatagacacaacaaaagtgggaagaggaagagacttc
agtaaagaagagcctcttaaatgttcacttgataagctcattgatggtgtgcacttggtc
ggtaaacatgacggggatgtcacagatctgtccttatctcaatggatgactacccgtctg
gcttcagcatcaaaagatggcacggtaaaaatctgggatgatcgcaggacagtgccttta
tctgtgatgaaaccgcatgatggtaaagctgtttattcggtttctttccttacagcacca
gagcaaccaaatcatataaatctcgttacagcggggcctctcaaccgagaagtaaaaatc
tgggcttcctctgataaggaaggttggttgttgccaagtgaatctgagacttggagatgc
actcaaactctggaacttgtgagttctctggaaaataggtttgaggaagcatttttcaac
caagtagcagtgttgccacaagctagccttattttgcttgcgaatgccaaaaagaacgct
atatatgctatccatgttgagtatggtccagatcctgcttctactcgtctggactatata
gcagatttcacagttgcaatgcctattttaagtctgacgggaacacatgaaagccagcct
gatggtgaacatgtagtacaagtctattgtgtccagacaatggctatccagcagtatgga
ttggagttatcactctgtttgcctcctacagctgataacgctgggcttggtagggatctg
gctatttcccatgtatatgagagacctctagaagtagcatcagtggagccatcgacagaa
actaaaccactgagtgatcatcagggaacagaagctgatactgctactcatgtttcatcc
ccaactccttcatcaaacttggataatgctggatcttatgcagaagctgtcttgagaaga
gatgcttcaagaggtccatctcttggtgatcatgatggggacaagtcatcttttgattat
tcaaagaaaaggatggattctgatggtacaagtgggcaaggagcatttgataggaaggat
tgctttgggaatgaagagccaagaggtggccatgttgatggtacagtttcagatcctcat
cccacgtttaaggtcggagtgaatgccacacacttgattaccccatctgaaattatttca
ggtgtgctcccatctgctgaatcgactgctaatggcagcccacagaatgtagaaatggag
tcaaaacttgtggttgaggaaaaagcagatcaaaatattggatttgaggatgttaaggag
acccaaattgttcaagagaaaatggagagagttaacatgtcttcagagcaaactgtacag
acaattagtgaacgctcggtaacaactgacaagtacagtgtggaagattcacagagatca
gaccccacacttctgaaacaacattctggtgctcgggatgaaaatcttccaagaagaaca
gctgaagctactgaaaacatcaatggctcttcgtcaaggaacttgcagttaccctcagct
accaaagaggagaaagttctgcatcctcaggtttctgggcagatgtctcctattacaagc
actttcaactctactgattcatcacatgaacatccaagcaatacaaaccctgccattgat
tctgtcccgcaagtagctgccattcaaggaacattgcaacagcttatggcaatgcatact
gacatgcaaaagcagctgaacgcaattgtgtctgctcctattgcaaaggagggcaaaagg
atcgagacatcactcgggcgtaatattgagaagtccataaaggctaacgttgatgccatg
tgggctcgtatccaggaggaaaatgcaaggcatgaaaaggttgaaagagagcgaatgcag
cagatttctactctaatcacaacttctgtaaacaaggacattcctgctatactggagaaa
tcactaaagagagaaatatcgttgttgggacccaccattgcacgaacaacaacacctatc
attgagaagtccttgtcttctgctgtttcggattcgcttcagaaagttctcggggaaaag
gttgcgaatcagctggataagtccataagtacgaaacttgaagctactgttgctaagcag
atccaaacacagttccatacatctgccaagcaggcacttcaggatgctttacggtcaagc
tttgagtcatcaattatcccagcatttgaacaatcttgtaagacaatgtttgagcaagtg
gatggtgcattccagaagggcatgtccgagcatggtactgctatccagcagcaggttgca
gcagcacatagtccattggcacagactttaagggaaacaatcaattcagcatcatcaatt
acccagggtcttacatcagagttacttgatggccagcgcaagcttttggcactagttgca
tcagggaacccaatatcacataatactagtgcattgcagcccatcaacggaccaatacct
aatctccccgaggctgatgttccactggacccgatgaaggagctaacgagattattatct
gagcaaaaattcgatgaggcgtttacgatggctcttcaaagaagtgacgtctccatggta
tcttggttgtgctctcaggttgatttgcaagggttgtgtagactgaaccccgttcctctg
aaccaaggggtccttctggcccttttccagcaactggcatgcgacataaccaacgacaca
cccctgaagcttcaatggatgacagcggtcgccatggcaatccaaccaacccatcagatg
attgcagcgcatgtgaggccaatatttgagcaagtctatggcgtcttggcccgccaacag
tcggtgccaggaaccaccccactggaagcgaacaacatccgcttaatgatgcatgtaatc
aactcggtgatgatgacccacaagtga
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