Triticum dicoccoides (wild emmer wheat): 119337374
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Entry
119337374 CDS
T07278
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03030
DNA replication
tdc03410
Base excision repair
tdc03420
Nucleotide excision repair
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119337374
03410 Base excision repair
119337374
03420 Nucleotide excision repair
119337374
03430 Mismatch repair
119337374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdc03032
]
119337374
03036 Chromosome and associated proteins [BR:
tdc03036
]
119337374
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119337374
DNA replication proteins [BR:
tdc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119337374
DNA Replication Termination Factors
ELG1-RFC complex
119337374
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119337374
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119337374
Check point factors
HRAD17(Rad24)-RFC complex
119337374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
AAA_lid_RFC1
Ig_Tie2_1
DUF815
Motif
Other DBs
NCBI-GeneID:
119337374
NCBI-ProteinID:
XP_037465400
LinkDB
All DBs
Position
1B:complement(394291364..394299007)
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AA seq
591 aa
AA seq
DB search
MAIDTPPPVSPTAWPASPTGRTLSAAFADDRRREARRRAVHLLPGCGRPPQLRSKLINRV
LHRFGGACVPKSTAATPTRTPPLPRRSSVSTPPRPRPSAASTPPTSTQVPARLDQADAER
AAARRPLREREDAAAVGREPTPPVSQASAVAATEVVASLASNWRSDTATTVGRGANIWVR
VSRKPKSPQVDSPQLSVESTAAAEDQYVWADRYRPSVLGEFICNKTVADELHRMVTERQC
NHFIFEGAQAVGKRSMVLALLRDAFGPDDLKIEEITKRIELKGEIAKHIDVKVKISDHHV
EVNLADLHGYEKYVITTLLNESIPPPDLICDHANCKVIVVHDADRLSSDLQHYIGWFLGR
YAGCNKVIFSCSSSSNLDAVEHLCKVVRLKPPSFDEIIKVLEFIATQEGIDLPRGLASRI
AASASNNLRQAIRSFEATWKANYPFTKDQPILTGWEEEIYDVAKKIMEEPSPKQLYLIRR
KIRKMIEHNVSPYFIFCHLVNELKRDRDEDFQNSIDELALELNENQQCKEYKSQDTISDK
RAINIEGFAVEGPDQGEAIQCFIKIEEFTVRFMSFYRSLITKNSSRGGVPS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgacaccccgccacccgtatccccgaccgcctggcccgcttccccgactggc
cgcaccctctccgcggccttcgccgacgaccgccgccgcgaggccaggcgccgcgccgta
cacctcctcccgggctgcggcaggccgccgcagctgcgctccaagctcatcaaccgcgtg
ctccaccgcttcggcggcgcctgcgtccctaagagcacagccgccacccccacccggacg
cccccgctgcctcggcggtcgtcagtgtcgacgcccccgcggcctcggccgtcggcggcg
tcgacgccgcccacgtcaacccaggtaccggcacgcctagaccaggcagacgcggagaga
gccgccgccaggaggcctttgagggagagagaggacgctgccgccgtcggccgagagccg
acgccgccggtgtcccaagccagtgccgtggcggctactgaagtggttgccagccttgcg
agcaactggagaagcgataccgccaccaccgtcgggagaggagcaaacatctgggtgagg
gtttcgcgcaagccgaagtcgccgcaggtggactctccgcagctgtcagtggaatcgacg
gcggcggcggaggaccagtacgtgtgggcggacaggtaccggcccagtgtactcggggaa
ttcatctgcaacaagaccgtcgccgatgagctccaccggatggtgaccgaacgccaatgc
aaccatttcatatttgaaggggcgcaggccgtcgggaagagaagcatggtgctggccctt
ttaagagatgcttttggtcctgatgatctcaagatagaggaaatcacaaagagaatcgag
ctgaagggagaaatcgccaaacacattgatgttaaagtgaagatttcagatcatcacgtg
gaggtaaacttggctgatttacatggctatgagaagtatgtcataactactttgttgaat
gagtcaatcccaccaccggacttgatttgcgatcatgctaactgcaaagtgattgtggtc
catgatgctgataggctttcgtctgatcttcagcattatattggttggtttttgggaagg
tatgcaggttgcaacaaagttattttcagctgctccagttcttcaaaccttgatgccgtt
gaacatctatgcaaggttgtccgacttaaaccaccttcatttgatgagataatcaaggtt
ctagagttcattgctacacaagaaggcatagatttgcctcgtggacttgccagtagaatt
gcagctagcgcgagtaataatctccgacaggcaatacgctcttttgaagctacatggaaa
gcaaactatccattcacgaaagaccagcccattttgactggatgggaggaggaaatttat
gatgttgccaaaaaaatcatggaggagccaagtccaaagcagttgtatctcattcggagg
aagatcagaaaaatgattgaacataatgtgtcaccttatttcattttctgtcacttggtt
aatgaactgaaaagggacagggatgaagattttcagaatagcatcgatgaactggcactg
gagttgaacgaaaaccagcagtgcaaagaatacaaatctcaggacacaatttctgacaaa
agagctatcaatatagaaggtttcgctgttgaaggccctgaccaaggggaagccatccaa
tgcttcataaagattgaagaattcactgtgaggttcatgagcttctacagatctttaata
acgaagaactcaagcagaggcggtgttccttcatga
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