Triticum dicoccoides (wild emmer wheat): 119337544
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Entry
119337544 CDS
T07278
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119337544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119337544
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119337544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Utp13
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_Nup120_160
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
WDR54
Ge1_WD40
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_WDR75_2nd
WD40_like
Polysacc_lyase-like
UTP15_C
Motif
Other DBs
NCBI-GeneID:
119337544
NCBI-ProteinID:
XP_037465604
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Position
7B:complement(710823242..710828872)
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AA seq
880 aa
AA seq
DB search
MALSQGPKNNYRCDRSLQQFYTGGPFAVGRAPRGEGEGDAEEAFLACACGSELRVVSAAD
ASAIGEPIDGDSEAVTGIALSPDSRLLFAAGHSKLIRVWDLASRTCIRSWKGHDGPVMAM
SCHASGGLLATAGADKKVCVWDVDGGFCTHFFRGHTGVVTTIMFHRDPKRLLLFSGSDDG
TVRVWNLESKKCIAVLNAHFSTVTSLALSEDGLTLLSAGRDKVVNVWDLRKYASKKTIPA
YEMIEGVSFIGPGSGILACLGVEAAKLKEKTDGYFLTVGERGIVRIWCLESAVCVFEQQS
SDVTINSENEESRRGFTATNMLPDDQGILCVTADQQFLFYSCTRTDEGTFQLNLYKRLIG
YNDEILDLKFVGEDEQYLAVATNLEQVRVYDVASMSCSYVLAGHTEIVVCLDTCVSASGK
TLVVTGSKDNTVRLWDMEKRSCIGTGKGHLGAIGCVAFSKKSKNFFVSGSSDRTIKVWTW
DDTLIDAGGEVPLKAKAGVAAHDKDINSLSVSPNDGLVCSGSEDRTASIWKLPNLVSSVV
LKGHKRGIWSVEFSPVEQCVITSSGDKTVKIWHVADGSCLKTFEGHTSSVLRASFLSRGT
QFVSCGSDGLVKLWTIKTNECIATYDKHDGKIWALAVGKRTEMLATGGTDSDLNLWHDCT
MEDKQEDFLKKEEEVLRGQELENAVSDSDYTRAIQLAFELRRPRRLLELFSQLCRKADPE
DPIEKALVGLPKEGLRVLLEYIREWNTKPKFCHVAQFVLFRVLRSLPPTDILEIKGISEL
LEGLIPYSQRHFSRVDRLVRSTFLLDYTLARMSVVDPDVDAGTTKDSSMNNVEMAPAEPA
QDTPEKPGRKRKSSKTTSQSSKKSSKKVKASSSAVVSVEA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcgcaggggcccaagaacaactaccgctgcgaccgctcgctgcagcagttc
tacacgggcgggcccttcgccgtcgggcgcgccccccgcggcgagggcgagggcgacgcc
gaggaggcgttcctcgcgtgcgcctgcggcagcgagctgcgcgtggtgtccgccgccgac
gcctccgccataggggagcccatcgacggcgactccgaggccgtcacggggatcgcgctg
tcccccgactcccgcctgctctttgctgctggccacagcaagcttatcagggtctgggac
ctcgcgtctcgcacttgcatccgcagctggaagggacatgatggtcctgttatggccatg
tcatgccatgcttctggtgggttgcttgcaaccgccggagcagacaagaaggtttgcgtg
tgggatgtggatggtgggttttgcacacatttctttagaggtcatacaggtgttgtgacg
accataatgttccacagagatccaaagcgccttctgttattttcaggaagtgatgatggc
acagtgcgcgtttggaaccttgaaagcaaaaaatgcattgcggtgcttaacgcacatttt
tcaacagtgacttcgttggcattatcagaagacgggctaacattgctcagtgcaggaagg
gataaggttgtgaatgtgtgggatcttcggaagtacgcctcaaagaagacaataccagca
tatgaaatgatagaaggtgtttccttcattggaccagggagcggcatcttggcttgtttg
ggtgtcgaagcggcaaagttgaaggaaaaaacggatggttattttcttacggttggtgaa
cgtggaatcgtgcgcatatggtgcttggaaagcgctgtctgcgtgtttgagcagcagtca
tctgatgtaaccatcaactcagaaaacgaggaatctagaaggggctttacagctactaat
atgttgccagatgatcaaggaattctatgtgtcactgctgatcaacaatttttgttctat
tcttgtacaagaactgatgaagggactttccagttgaacctatataaacgtctaataggt
tataatgacgagattcttgatttgaagtttgttggggaagatgaacaatatcttgccgta
gccactaacttggagcaggtccgtgtttatgacgttgcatcaatgtcatgttcttatgtg
ctggcgggtcacactgaaattgttgtttgccttgatacctgtgtgtctgcttctgggaag
acacttgttgtaactgggagcaaagataatactgtaagattgtgggatatggaaaagaga
agctgtattggtactggtaaaggccatctaggagctattggttgtgttgctttctcaaag
aagtcaaagaacttttttgttagtggtagcagtgaccgaacaatcaaggtttggacctgg
gatgatacactcattgatgctggcggtgaagttcctctcaaagcaaaggctggtgtagct
gcacatgataaagatattaattctctgtctgtctcacctaatgacggccttgtttgcagt
ggttcggaggaccgaactgcaagcatatggaaactccctaacctagtgtcatcggttgtc
cttaaagggcataaaaggggcatttggtcagttgagttttcccctgttgaacaatgtgtc
ataacatcatctggtgacaaaactgtcaaaatatggcatgttgctgatggctcatgcctg
aagacatttgagggtcatacatcaagtgttttaagagcttcattcctttcacgtggaact
cagtttgtttcttgtggaagcgatggtctagtgaagctatggacgataaagacgaatgag
tgcattgctacgtatgacaagcacgatgggaagatttgggcactggctgttggcaagaga
actgaaatgcttgctactggcggaactgattctgatcttaacctttggcacgattgcacg
atggaagataagcaggaggatttccttaagaaggaggaggaagttttaagaggccaggaa
ttggaaaatgcagtgtcagattctgactatacaagagcaatacaactcgcatttgagctt
agaagaccacgcaggcttcttgagttattctcacagctttgcaggaaagctgatccagag
gaccctatagaaaaagcccttgttggtctcccaaaggaagggcttcgcgtgcttcttgag
tatatacgtgaatggaacacaaagcccaagttttgtcatgttgcacagtttgtacttttt
cgggtgttgaggagcttgcctcccactgatatcctggagataaaaggcatcagtgagctc
ctcgagggcctcattccatattcgcaaaggcacttcagcagagtcgatagactagtacgc
agcacgtttttattggactacaccttggcccgaatgtctgtcgtagacccagacgtagat
gcgggcacaaccaaagactcgtcaatgaacaatgttgagatggcgccagcagagcctgca
caggacaccccggagaagccgggcaggaagagaaaatccagcaaaacaacaagccaatca
agcaagaaaagtagtaagaaggtgaaggcttcttcgagcgctgttgtttctgttgaggcg
taa
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