Triticum dicoccoides (wild emmer wheat): 119338453
Help
Entry
119338453 CDS
T07278
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119338453
Membrane trafficking [BR:
tdc04131
]
Protein recycling
Others
EARP complex
119338453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
119338453
NCBI-ProteinID:
XP_037466678
LinkDB
All DBs
Position
1B:416665513..416675986
Genome browser
AA seq
1076 aa
AA seq
DB search
MRGDAPPPTAPSASSSSASPSLFGGGGGELFESGPSPLVFLPLLLIQGGGMDLSRVGERL
LSSVRSARSLGLIPPTPAPAPSRPEVPARAAAAAAAARAIAGLPPHERINLPSNSEDLVS
IYGSNPQGPAVDELEEVFYEEEFDPIKYILANISEGAGDATYFDKQSTLRLAQLDKIAER
LSHHVMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHISSSKNEVSRDLVVNVKSKKK
QALLDVLPVLTELRHAQDMQMELETFVEKENYFQAFQLLPEYLQILENYSGLSAVQEMGR
GIEAWLARTIRKLDNHLLGVCQTFSEESYLTVIDAFALMGDIGGMAEKMQSFFLQEVLSR
THIVLKEMLEEEVGNNTQRNRFTYSDLCVQVPESKLRSCLLKTLESIFSLMRSYYAIMSF
CPEAKNNTSKSPSGTSADTGRSHSSAVVNQDDVAATKSDRMPSSVSNPDASTSGTDAPFY
QLRTDATKLVKYTFERGRRNLWQLATSRLSVLLACSAVSSTSIYQFLKNYEDLTLFILAG
EAFCGFEASEFRQKLKTVCLNYIVTFHRQNIYALKMVLEKESWTIMSAEASQIISLAGLT
GDGAALISPTSGSSTLPKDYFRGNSTATNTGRQNNGFASWHNMGNPFSFKLENGSAESPK
GNVLFNSSVGNGNNSPFDEENEDLLADFIDEDSQLPSRTLKTKIVKGNTSRWKDGDISSQ
TGSSLSLLRMMDKYARLMQKLEMVNVELFKGMFQLFGIFYHHIYETFGYQDRSQSGKPLP
DSQSFRLKAALSKITQDSDQWIKPQNSLYPSSSSLSIGSTIAQMDVMPTAPPSSMFTSYG
LKERCAAAETVSLVARVLNRSRAHLHSVLSQNNTSVVEEFFGTLVDTVPDLAEHIHRTSA
RMLLHINGYPDKIANAKWEVKELGTDHNGYVDLLLGEFKHYKTRLDHGGISKELQHLLLD
YGIESIAEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHIVSSNVKPRLQIVETFVKA
YYLPETEYVHWARSHPVRTRRILLEAHFKLEDANNLHPLSLRNSVGIQQEPGCRAG
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgacgcgccgccgcctaccgcgccatcggcctcctcctcctccgcctccccc
tccctcttcggcggcggcggtggcgagctcttcgagtcggggccctcgccgctcgtcttc
ctgcccctgctcctgatccagggcggcggcatggacctctcccgcgtcggcgagaggctc
ctcagctccgtccgctccgcgcgctccctcggcctcatccccccgaccccagcccctgcc
ccttcccgccccgaggttccagctcgagctgctgcagccgcggccgctgcgcgcgcgatc
gccgggctgccaccacacgagaggatcaacctgccgtccaattcggaggacctggtctcg
atctacgggagcaacccgcaggggccagccgttgatgagctcgaggaggtgttctatgag
gaggaattcgaccccataaagtacattctggcaaatatttcggaaggagctggtgacgcc
acctatttcgataagcagtctactttgagattagcgcagctcgacaagattgcagaacga
ttgtctcatcatgttatgggtcaccatgaagaaatggtgaaggggatgcagttagtgatg
gagttagaacaagacttaaaggttgcaaatgtgatctgcatgaacggtcgaaggcacata
tcctcttccaagaatgaggtgtcaagggatctggttgtcaatgtaaaatcaaagaaaaaa
caagctttgttggatgttcttcctgttcttacagaacttcgacatgctcaagatatgcaa
atggagctagaaacttttgttgagaaagaaaattactttcaggcatttcaattattacca
gagtatctgcaaatcttggagaactattcaggcctttccgccgtacaagaaatgggacga
gggattgaggcatggttagcaaggacaatcagaaagttggacaaccatttactgggagtt
tgtcagaccttcagtgaagaaagctatctaaccgtgattgatgcattcgcattgatgggt
gacattggtggcatggctgaaaagatgcagagtttctttttgcaagaagtactctctcga
acacatattgtcctgaaggaaatgttggaagaggaggtgggaaataatacacagagaaat
agatttacatacagtgatctttgtgttcaagttcctgagtccaaactccgctcctgcttg
ttaaaaactcttgagagcatattttcgttgatgcggtcatattatgctattatgagcttt
tgcccagaagcaaagaataacacgtctaagagtccaagtggaacttcagctgatacagga
agaagccattcaagtgcagtagtcaatcaggatgatgttgctgccacgaagagcgacagg
atgccatcttctgtcagtaatcctgatgctagcacatcaggaacagatgctccattctat
caactgaggacagatgctacaaaacttgttaaatatacatttgaaaggggccggagaaat
ctttggcaactggcaacaagtcgcctgtctgttttactggcttgttcagctgtttcttca
actagcatataccaatttctgaagaactatgaagatctcacactatttattctggccggt
gaagcattttgtgggtttgaagctagcgaattccgacagaagctgaagacagtctgtttg
aactacatagtgacctttcaccggcaaaatatatacgcacttaaaatggtactggaaaag
gaatcttggacaataatgtctgctgaagctagtcagataattagtttagcaggacttact
ggtgatggcgctgcactgatttcgcctaccagtggtagttctaccttgccaaaagattat
ttccgtggaaattctaccgcaaccaatacaggaaggcaaaacaatggatttgcttcctgg
cataatatggggaacccattttctttcaagttagagaatggctccgcggaatcccccaag
ggcaatgtgctgttcaactcatcagttggcaatggaaataattcaccatttgatgaagag
aatgaagaccttcttgctgatttcattgatgaagatagtcaattgcccagtaggacattg
aaaacaaaaattgtgaaaggcaatacttcacgttggaaagatggagacatttcatcacag
acaggatcatcactttctttattaaggatgatggataaatatgctagacttatgcaaaag
ctggaaatggtcaatgttgagctttttaagggcatgttccaactttttggcatcttttat
caccacatatatgagacatttgggtaccaggacaggagtcaaagtggcaagccactacct
gattctcaatcatttcggcttaaagcggctttatcaaaaataacacaagactctgatcag
tggattaaaccacagaacagtttgtatccatcttcatcatctttatcaattggttcaact
attgcccaaatggatgtgatgcctactgcgcccccaagctcaatgttcacctcctatggg
ttaaaggagagatgcgcagctgccgaaacagtatcactggttgctcgagttttgaacaga
tctagagcccatctacattctgtgttgtctcaaaataatacttctgttgttgaagagttt
tttgggacattggtggacaccgttccagacttggctgagcacattcatagaacaagtgca
cggatgcttttgcatatcaatgggtatccggataagatagcaaatgccaaatgggaggtc
aaggagcttggcacagaccacaatggttacgttgatttattattgggcgagttcaaacat
tacaaaacaagattggatcatggaggaatttctaaggagctccaacacctcttgctggac
tatggcatagagagcattgcagaagtgttagttgaagggctgtctagagtgaaaaggtgc
actgatgaagggcgtgcattgatgtcacttgaccttcaggtactgatcaatgggctgcaa
cacatagtatcgtcaaatgttaagccgaggctgcaaattgtggaaactttcgtgaaggct
tattatttgccagagacggagtatgtccactgggcacggtctcatccagtaagaactcgg
agaatcttactagaagctcattttaaactagaagatgcaaataatttacaccctctatcg
ctgcgtaactctgtaggaatacagcaagagccaggttgtcgggctggttaa
DBGET
integrated database retrieval system