Triticum dicoccoides (wild emmer wheat): 119339318
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Entry
119339318 CDS
T07278
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119339318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119339318
Membrane trafficking [BR:
tdc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119339318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
Beta-prop_EML_2
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
VPS8_N
WDR55
Beta-prop_WDR3_1st
WD40_WDHD1_1st
TPR_VPS8_2
Beta-prop_HPS5
Beta-prop_WDR5
ANAPC4_WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_TEP1_2nd
WD40
Beta-prop_IFT140_1st
Beta-prop_Aladin
TPR_Vps41
WD40_Gbeta
Beta-prop_WDR3_2nd
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
119339318
NCBI-ProteinID:
XP_037467323
LinkDB
All DBs
Position
7B:complement(662038489..662051394)
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AA seq
2038 aa
AA seq
DB search
MVIIEEIVQALEIPERKKTPAIVPSRWVPPEEGLIKINTDGATNMGLGRDLIAQDMGLQH
VLLETDCQEIQRLWDAPQSTVETERIETTNKLPSPHLGETAPVSLVPSSSPAMASQPPPP
PHELDLEAFPPSSPPPASDADHRRAVDDLLLLLSSSDSDGDDETNPTPSTNYKTPIKAPS
PPPNELDLEAFPPLSRASSSVSDADADRRRAVDDLLLLLSSSDSDEDDEPNLTLSTKHKP
LTRIKATPPPPKPSPSPLPLPSASSGRSTSASPSATLSYLVPRTFSNNAASSSRPLPSLF
RGVRPSPKPGAALAAAAAASRAILTPYAAAIKSRRTASAPIEKLLDQGSEGFLSTGNFKG
DEVAEKVSEEVVARVTDETIGGNGVEELEEGKHGEVGTEENSKPSESADIGNVDFVAAEN
VNEHEQLEGENLAETDQPGSQIRFIAEENGDEPISKGIFVESGDIQDGSVSHQKSDDGLE
IERSETDLEEQMKSERIIDKVIEETLEISRMAEKNAEKKPKVPIKPLEWAEELEKRQASF
GQHWEEGAAAQPMRLQGIGKGQPAIGYMQIEVDNPITRAMASPSFRQEHGSPQVLAVHRS
YIAMGMSNGSVIIVPSKYSIHQADDTNAKMLCFWNQGEKTQSPVTAMCFNPQGDLLLVGY
GDGHMTIWDVQKATAAKVIYGEHTGAVVHVCFIHQSKAITGDSKGLVLMHTFSIIPVINR
LTVKGIQRLFDGHTGIVLSACPLLANESFGSGNQTTSSSGGHGSMMGGVVGVDSRWKFFN
EGSSPMEDGVTVMFIMHQHALVVRLHTNTDHVDHIETFSRPEGAREGSIAYAAWKYTSSS
SDSSPIDEERVSWLALAWDRQVQVVKFVKSKMIKHKDWKLGSVSVGVAWLKDKMLAVLNL
RGQLCLFSKDGSELRRTIFILDGLVFDDSILYHTHFSNRFGNPERHFNNSVAVRGATVYI
LGPSFLTVSRLLPWKERIEALKRAGDWMGAMDMAMKLYDGHTQGVVDLPRKVDSIREAIV
PSLLELLLSYIGYVFEYISIALSNHTGKGGAADGLIDADRSLLTEREEQYARVGGVAVEF
CVHIGRNDILFDTVFSKFVAAQSGGVFLEALEPYILKDMLGSLPPEIMQALIEHYSGKGW
LQRVEQCILHMDISSLDFNQVVRLCREHGLYGALIYLFNQGLNDFRTPLEELLSVIQNAT
RKDATCYRILVYLKYCFQGLAFPPGHGMIPRAQLHSVRRELVQFMLEESKMLTSEVFKGF
SSSSGKCPNICYLLWMDTEATLEVVKCAFAQANFKPTCTPDASVSKDEDDTNIERTDSQN
VLLQSVVDTIIHIIGLENEAIHSVVVGTAESEESELWPSVKDFGYIIEFVSFSISSKRVK
PSQRVLKHILKYFTSSNTPKYDDKNVLAQKEVLQLFNVVPQADWNSDYVLHLCLDAHFHQ
ACGRIYTARNQNLSALDSYMKDIVEPYHAFIFINKKLFQLTGDEALSFRSTVIFRFVELV
NLSRECAFVLFLDHFQNEIQQILSEFHSDNRSHFLFLKTAMEVHLSGKLDFSALTARNHE
IVARQYFSGEIEDYLQRLSNFSKLFDRNLVSIIDELFEPYLKLLCQYEPRSVLKFLETFD
SNRLDGCLQPCLDYGVTDAAAFLQERRGYVQSALALVLAGLDEKISQFITSVENVFSHIS
SKSISEIEQPAIVLKMSEAHPVLDTLRSSIGLCQRNSQRSDPGKSQSLWFQLLDSFSEAL
KKLYGSKDVNGKGCPSKGDETTNGHPTGNGFSQQTAISAYQRCLNTLRRVFSQFIGEIIE
AMAGYIPLPTIMSKLLSDNGSQEFGDFKLVIHRMLSMHLYEKRILETTKSVIEDDSFYTL
SLLKRGVCHGFAPHTFVCCVCSCSVSKGVISAVRVFSCGHATHLHCEAEQSKSSSGDFKD
GCSVCLLASDTQTGKKSPIISENGLPKYPMVENEVAYAVHHNNETNHVERSRGLQQMSRF
EILRSLQKAEKSLHIETVPPLKLSPPAIYHEKIQKRVSLAGESSRHSIGSEKHRKYCT
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atggtgattatcgaggagattgttcaggcacttgagatcccggagaggaagaagacccca
gccattgtcccttcgaggtgggtgccaccggaggaggggttgatcaagatcaacacggat
ggagcaacgaatatgggtcttggacgcgatctaattgcacaagacatgggcctccagcat
gtgctgttggagacggactgccaggagattcagcggctctgggatgcacctcagagcacc
gtcgaaaccgaaagaatcgaaactaccaataagttgccatcaccgcacctcggcgagacg
gcgcccgtctccctcgtgccgtcgtcgtcgccggcgatggcatcccagccaccgcctccg
ccccatgagctcgacctagaggccttccccccgtcttctcctcctcccgcctccgacgcc
gatcaccgccgcgccgttgacgacctgctcctcctcctctcttcgtccgactccgacggc
gacgacgagacaaaccctacacccagtaccaactacaaaacccctatcaaagccccatcg
ccgccccctaacgagctcgatctggaggccttccccccgttgtctcgagcctcctcctca
gtctccgacgccgacgccgatcgccgccgcgctgtcgacgacctgctcctcctcctctcc
tcgtccgactccgacgaagacgacgagccaaaccttacactcagcaccaaacacaaacct
ctgacccgtatcaaagccacaccgccgcctcctaaaccttctccatctcctctgccgttg
ccttccgcgtcctccgggagatccacatccgcatccccgtcggcgacgctctcctacctt
gtcccgagaaccttttcgaacaacgctgcctcctcgtcgaggccactcccctcgctcttc
cggggtgtccgccccagccccaaaccaggcgccgccctcgctgcggccgcagccgcgtcc
cgcgctattctcactccgtacgccgctgcaattaagtcgcggcgcactgcctccgcgccc
atcgagaagctcctcgaccaaggctccgagggtttcctttctaccggaaatttcaaagga
gatgaagtagctgagaaggtcagtgaggaagtggttgctagggtgacggacgaaactatc
ggcgggaatggtgttgaagaattggaagagggcaagcacggtgaagtggggactgaagag
aattccaagccctcagaatcggcggacataggcaatgtcgattttgttgctgcggaaaat
gtcaatgagcatgagcaacttgagggcgagaatttggctgaaactgatcaacctgggagt
caaattcggtttattgctgaggaaaatggtgatgagccaattagcaaaggaatttttgtg
gaatctggtgacattcaggatgggtcagtttcccatcaaaagtctgatgacgggctggaa
attgaacgttctgaaactgatttggaagagcaaatgaaatctgagaggatcatcgataag
gttatcgaagagacgttggagatcagcaggatggctgagaaaaatgcggagaaaaagcca
aaggtgccgataaaaccattggagtgggctgaggagcttgagaagaggcaggcctcattt
gggcagcactgggaggagggagcagcagcgcaaccaatgcgcctgcaggggattgggaag
ggccaacctgctattggttacatgcagattgaggtggacaacccaataactcgtgccatg
gcctctccgtcttttagacaggaacatggctctcctcaggtcttagcagtacataggagc
tatattgccatgggcatgtccaatggatctgttatcatcgtcccaagcaaatactccatc
catcaagctgatgatacaaatgcaaagatgctgtgcttttggaaccaaggtgaaaaaact
caatcaccagtgactgccatgtgcttcaacccgcaaggggatcttctgttagtaggatat
ggtgatggtcatatgacaatttgggatgtacagaaggctactgcagcaaaagtcatatat
ggcgagcacacaggagctgtagtgcatgtttgttttatccaccaatctaaagccatcact
ggtgattcaaaagggcttgttcttatgcacacattctcgattatccccgtcattaatcgc
ttgactgtcaagggaatccagcgcctttttgatggacatactggaatcgtgctctcggcc
tgtcctcttctagcgaatgaatcctttggttctggcaaccaaacaacttcctccagtggt
ggtcatgggagcatgatgggaggtgtagttggagtagattccagatggaagtttttcaat
gaaggttcttctccaatggaggacggtgttacagtcatgttcattatgcatcaacatgct
ctagtggttagactccataccaatactgaccatgttgaccatattgagaccttctctaga
ccagaaggagcacgagaagggtcaattgcttatgctgcatggaaatacacatcatcctca
agtgattcatcgccaattgatgaagagcgggtatcttggcttgcgcttgcatgggaccgt
caagtacaagtggtaaaatttgttaaatcaaagatgatcaaacataaggactggaagctt
ggtagtgtctccgttggtgttgcctggttaaaggataagatgttagctgtccttaacttg
agagggcagctctgtttgttctcaaaggatggcagtgagcttcgcaggactatctttatt
cttgatggtttggtcttcgatgacagcatactgtaccatacacatttttctaacaggttt
ggtaaccctgagaggcactttaacaactcggtcgcagtaagaggtgctacagtatatatt
cttggcccaagctttcttacagtttcgcgacttcttccatggaaagagcggattgaagca
ctaaagagggctggtgattggatgggtgcaatggacatggcaatgaagctttatgacggt
cacacacagggtgttgttgatcttccgagaaaagttgattctataagggaagccatagtg
ccgtctctattagagttactgctgtcatatataggttatgtcttcgaatatatttctatt
gcattgtcaaaccatactggaaaagggggagcagcagatggcctgatagacgccgataga
tccctgctgacagagagagaagagcaatatgcccgtgtaggaggggttgcagtcgagttt
tgtgttcacattggacggaatgacatcctgtttgacacagtcttttctaagtttgttgct
gctcaaagtggaggtgtgtttctggaggcactagagccatacatattgaaagatatgctt
ggttctttaccccctgagatcatgcaagctctaatagagcattatagtggcaaaggatgg
ttgcagcgagtcgaacaatgcattcttcatatggatatttcatcactagattttaatcag
gtagtcagactgtgtcgtgagcatgggttatatggtgccctaatatatttatttaaccaa
ggcctgaatgatttccgtacacctctagaggaacttctatctgttatccagaacgctact
aggaaagatgctacttgctacagaattcttgtttatctgaagtattgcttccagggccta
gcatttcctccagggcatggaatgattccccgagcccaacttcattcagtgagaagagaa
cttgtgcaattcatgcttgaggagtctaaaatgctcacttctgaagtatttaagggtttc
agttcttcttctggaaaatgcccaaacatatgctatctactatggatggatacggaggct
actctggaagttgtcaagtgtgcttttgcacaagcgaattttaaacctacttgtactcct
gatgcatctgtgtctaaggatgaagatgatactaatattgaaagaacagatagtcaaaat
gtcttgttacaaagtgtagttgacaccatcattcatattattggtttggaaaatgaggcg
atccattccgttgttgtgggtactgctgagtcagaagaatcagaactttggccttcagtg
aaggattttggttatataattgaatttgtgtccttttctatttccagtaaaagggtaaag
ccatctcaacgagttcttaaacacattcttaaatacttcacgtcatccaatactccaaaa
tatgatgataaaaatgtgctagctcagaaagaagttcttcagctcttcaatgtggttcct
caagctgactggaattctgattatgtgttgcatctttgtttagatgcccattttcatcag
gcatgtggcaggatatatacagccagaaatcaaaatttgtctgctttagatagttacatg
aaggatatagtggaaccataccatgcttttatcttcatcaacaaaaagttatttcagttg
acaggcgatgaagctttatcatttcgttccacagtaatatttcgttttgtcgagctggtc
aatctaagcagggagtgcgcatttgtcctgttccttgatcattttcaaaatgagatccag
caaatattgtcagagtttcattctgataaccgcagccactttcttttcttgaaaactgca
atggaagtacacttgtcaggaaaacttgacttcagtgcactaactgcccggaaccatgaa
attgttgcacgtcagtacttctctggtgaaatcgaagattatctgcagagattatcaaat
ttctcaaagttgtttgatcgcaatcttgtttctattattgatgagttatttgaaccctat
ctgaagcttctatgtcagtatgaaccaaggtcagtcctgaagtttctggagacttttgat
agtaacagattggacgggtgtttgcagccctgtctagattatggagttacagatgctgct
gcatttctgcaagagaggcgtggttatgttcagagtgcactggcacttgttctagctgga
ctagatgagaaaattagccagtttatcacttcagtggaaaatgtgttttctcatatatcc
tcaaagagtatctctgaaattgagcaaccagccattgttctaaaaatgagtgaggctcat
ccggtgcttgatacattacgttcctctattggattgtgccaaaggaactcacagcgctca
gacccagggaagtctcaatcactttggtttcaacttcttgactctttctcagaagcactg
aaaaaattgtatggaagcaaggatgtaaatggaaaaggttgtccttccaagggggatgaa
acaacaaacggacatccaacaggaaacggattctcacaacaaacggcgatttcagcttat
caaaggtgtttgaatactctgcggagagtattctcacaattcattggagagataatcgag
gcaatggctgggtatatacccctacccacaattatgtcaaagctgttatctgacaatggg
agtcaagagtttggtgattttaagcttgtcatacatagaatgctgtctatgcatctttat
gaaaaaagaatactggaaacaactaagtcagttattgaggatgattcgttctataccttg
agcttattaaagagaggggtttgccatggatttgctccacacacttttgtttgttgtgta
tgtagttgctcagtttctaaaggtgttatttcagcagttcgagtattcagttgtgggcat
gcaacacatcttcattgtgaagctgaacagagcaaatcatcaagcggggattttaaagat
ggatgttcagtttgtctcttggcgagtgacacacaaaccgggaagaaatcacctataata
tctgagaatgggctacccaagtatcccatggttgaaaatgaagtagcatatgccgtccat
cataataacgagacaaatcatgttgagagatctcgtgggcttcagcagatgtcacggttt
gaaatactaagaagtctccagaaagctgagaagtctcttcatattgaaactgtacctccg
ttgaaactttctccaccagctatatatcatgagaagatacagaagcgagtaagtttggcg
ggagaatccagcagacactcaattggaagtgaaaaacacagaaaatattgcacttga
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