Triticum dicoccoides (wild emmer wheat): 119340026
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Entry
119340026 CDS
T07278
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119340026
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119340026
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
XPG_I_2
Peroxin-3
Chromo
Motif
Other DBs
NCBI-GeneID:
119340026
NCBI-ProteinID:
XP_037467838
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All DBs
Position
7B:445817989..445822670
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AA seq
727 aa
AA seq
DB search
MGVKNLWDILDSCKQKLPLNHLQNKKVCVDLSCWLVQFCTANRSPAFVRDKVYLKNLFHR
IRALLALNCSLIFVTDGAIPSIKLATYRRRLGCNSEADCDDTSSQPLTSLKRNKGSEFSR
MIKEAKHLGLALGIPCLDGVEEAEAQCALLDLSSLCDGCFTSDSDAFLFGARTVYRDVFI
GDGGYVICYEMEDIEKKLGFGRKSLISFALLLGCDYSNGVHGFGPEAACRLVKSAGDDSI
LDQILSDGVKATRKCKGKKAGIDKNKGGDICTKTSTSEVGMSQDSGGQFREVINAFLEPK
CHLPDSENVRRVCCQHPFRHSEFQQICEKYFEWTPEKTDEYILPKIAERELRRFSNLRST
SSALGIKPLLSEIPVPCPVLAITKQRKVHGSEYYEVSWRNMHGLQSSVVPGDLIRSACPE
KITEFLEKKDEEKKQKRKARPKKSAQAAVKDVDARLQELMLGIESECATFPPASNCPETG
DVHCVAPSMDIVDLSSPSPPLRACKSQKFIGSTTAAMNGVDLLSGMMESQSSTQSSDAQN
SESQNSTQSSDAQNSESQNSTQSSDAPSFTLDDDVIDLSSPLPPVAERQPCRFQDLPPYD
GAERRALTDLSNFPEKSSMLGVSDDRHKAGASDACAPVEASPPVVHGARMFNGRSNVPIV
SLAESEAGAIDLSSPSPVVDRRRNGNHGKDAIDISEADSSVVCPDDDEHERKARELRSFL
KSIRDEL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcaagaacctttgggacattctcgactcctgcaagcagaagctgccgctcaac
cacctccagaacaagaaggtgtgcgtagatctctcctgctggctcgtgcagttctgtacc
gccaaccgctcgccggccttcgtcagggacaaggtctacctcaagaacctcttccaccgc
atccgcgccctcctcgccctcaactgcagcctcatctttgtcacagatggggcaatacct
tcaatcaagctggctacttatagacgtcggctaggatgcaattctgaggctgattgtgat
gacacgagttcgcaaccattgacctcccttaaacggaacaagggatcagaattctcgcgc
atgattaaagaggcgaagcatcttggcttggccttaggcatcccttgcttggatggtgtc
gaggaagcagaagcacagtgtgcattgcttgatttaagctcattgtgcgatggctgtttt
acatcagattcagatgcttttctttttggggcaaggacagtttacagagatgttttcata
ggggacggtggttatgtcatttgctacgaaatggaggacatagagaaaaagcttggtttt
ggcaggaaatcactgatatcatttgcgttgcttcttggttgtgattattctaatggagtt
catggctttggcccggaagcagcatgtcgtcttgtcaaatctgcgggagatgattccatc
ctggatcagattttatctgatggagtaaaagctacaagaaagtgtaaagggaaaaaggct
ggcattgacaaaaacaagggtggtgacatatgcacaaaaacaagtacctctgaggttggg
atgagccaagattctggcggtcaattccgtgaggtaataaacgcatttctggagccaaaa
tgccatttgcctgattcagaaaatgtgcggagggtatgctgccagcacccattccgtcat
tcagagttccaacagatttgtgagaaatattttgaatggacaccagagaagactgatgaa
tacatccttccgaagatagctgagagagaacttcgaaggttttcaaatcttcgctcgaca
tcttcagctctaggaataaaaccattgttgagtgagattccagtaccatgccctgtattg
gcaattacgaagcaacgaaaagttcatggaagtgagtattatgaggtttcatggagaaac
atgcatggactccaatcttcagttgttccaggggatctcatcagaagtgcatgcccagaa
aaaataactgagtttttggaaaagaaggatgaagagaagaagcaaaagaggaaagctagg
ccaaagaaatcagcacaagctgcagtaaaagatgttgatgcgcggctccaagaattgatg
cttggtatcgagtctgaatgcgccacgtttccgcctgcaagcaattgtcctgagacagga
gatgtacactgcgtggcacctagcatggatatagttgatctgtcttctccatctccgccc
ctccgggcttgcaagtcccaaaagttcatcggatcaaccacagctgcgatgaatggggtt
gatttgctgagcggtatgatggagtcacaaagtagcacccagtccagcgatgctcagaac
tccgagtcacaaaatagcacccagtccagcgatgctcagaactctgagtcacaaaatagc
actcagtcaagtgatgctccgagttttacccttgacgacgacgtgattgatctgtcctcg
cccctgcctccagttgctgaacgacaaccttgccgcttccaagacttgccaccttatgac
ggagctgaacgaagagctctgacagatttaagcaatttccctgagaaaagcagcatgctg
ggcgtttcagatgacagacacaaagctggtgcaagcgacgcctgcgcaccagtcgaagca
tcgccgccagtcgtccatggtgctcggatgttcaatggccgaagtaatgtaccgattgtt
tcgttggcagaatcagaagctggcgccattgatttgtcttctccttctccggttgtcgac
aggagaaggaatggtaaccatggcaaggatgcaatagacattagtgaagctgacagtagt
gtcgtgtgtcctgatgatgatgaacatgagaggaaggcgagagagctcagatcgtttctc
aagagcattagagacgaactgtaa
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