Triticum dicoccoides (wild emmer wheat): 119340600
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Entry
119340600 CDS
T07278
Name
(RefSeq) uncharacterized protein LOC119340600
KO
K14311
nuclear pore complex protein Nup188
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119340600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119340600
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119340600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RICTOR_M
KdgT
Motif
Other DBs
NCBI-GeneID:
119340600
NCBI-ProteinID:
XP_037468423
LinkDB
All DBs
Position
7B:67267781..67275248
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AA seq
1964 aa
AA seq
DB search
MASGGAPASTSGSGGAGTKTVSASLWWDPFVALCDDLDRAAASPSAAVSDALAERIKGHH
AWLRGAVSMFGKPNGASRAALDAGQVAVGEHRLAVKPDLKEAALRASKSLDLDEVQSYIL
VKRSSESAPTTRDADPQELLRLVSLQYYLERQCLLKCIRRIFVHATCTDDDSGSTDAIKQ
EASLLGSDEMEQRLLSIIKDSLAAAFSVKSAADLTVSWLEESLIEINLILDILFLAICDN
FSRCNGGLWIALCSLFRDMLSGSYDVGKFAVSAEAKRSFHYAKAQLLFILVETLDLENLL
RMVHDEVSFSGGYSQYSVADILEMDIEVSRLPEFEVESGPLLLAWAVFHCLLLSLPGNNA
NLEIDHASYAQQAFELAPFNYLLGVLCSSIFRESDGPVSGFRAVLRSFISAFIASYEISY
QTEDSSLGVILNIICEVYGGEESLCMQFWDKDSCVDGPIRSVLQMLEKEYPFQITDLLRF
LSAVSYGTWPAQCVYNYLERMNGLTTLYATPGSVPDSLNYCDQIEIHHPISIPGMEGITL
PRGTRGYILRSLEGNAALVRWEFPHSGVFILLLTLAQDLYSCNYVEACDIMDLLYQMVSS
NQVLCSALLHADKSLAVQKSKSLGQIGEYIRIDIVKILCSSVFKYEQDGNNASIMSKTFS
VLTEFLKCVPYHVFDVALECGIFSSQLNDPSSDWLLSGALARMLFAASEENGDCSSLTTS
LLDFAIQVLRKAAAADDMISPFIVFSVQYIMVNHMNWKHKKYSRWKTTLKVFELVKSCIQ
VKPFLSKLGGIIWQMLLYDSSIHNVLWHNVCTSMQLLESRGSFSNGVEDIEDIQLVLCCG
LDIIFFMLSNLPEDLMPVAPFVTLVLSSSLKPLPFITATISSMSFQNSALQVSAARALSV
LCFTAHRVQPQLMENGSFLVDGSEIWKLQASISQILDKEDDTNNCLIVAIFSLLTSVARY
QPALFVSLTEENAMIQADHSNSANSQTNGSSTLNSSRSNSRLVEQMLGYIENSTEFMNSS
PSLLLSILDLLEALWESGVQFICILDKLRSSRTFWESLSCCIRATFDHCPVDSVDTVDEK
FSSRYNCQAKIFKIMSHELFLKGRLLVEAKTSNPVADGTKGQKEPSASYPSNVVCKWFDS
ALLEDFINHLSSNGYQKDLFHRAKVASCVCIIRLITKLSSGDTASLSFSAVKKIQLISSK
LLQHRAFIALLSQYALHGYSGEQELTSLVINDLYYHIHGELEGRQITPGPFQELLCFLLE
FKFFECNATEQPHSAFPAVSGNVLFDVAHTRDDLGVKFWNHSDWKPCKEVAEKMLDIMHK
ANLMKCHADAKLCTLRSFITFLSVYTGTSSSNELTLPDGGISATAMESAIRCACKYLQST
VDSLFPEVDTNEVLFPLLSGQVDLLLTLTRFSFHQAKQTKSYVHLYPVIVLLMRTSGAST
SFLVDLVPSSPALRKPVKSLLVLILSLFEFIYGKDAVKDGSGDANLFGESSIISTRLLPV
LCKLAENREYSDLAVGSMDLLLKGFIPPNVWLPILQKHFRLQAILHKCQNGAILSTQVIL
NFLLTLGRTKDGAKMLQSANIFAFLKVLLSKLSLDDSCFRNSLSSQAKDVHMWSLALAIV
ASLNHCMDDDVSRSSVANGTVSFLSGQVPLMSAYLSAQSVNTHQNKKRAVLQQSQTSLSA
LSLTENILSLLCVLAKYHFPRDTGMMQVDSELREIIIHLLAFISRGSARTGDSPNWNPSF
FCPPIAKEEVVLHEDPPLIRSKHGWFRLAASSSLSTAAISAPSNAALSLVIRDKNSGDSG
SVKQTRFTEMVAVQIYRIAFLIMKFLCSQAKEAVKRAGELEFVDLAHFPELPMPDILHGL
QDQVVSIVTEVLGANGSSALSGETDRVCRLLLVTLEASLYMELCVSQSCGIRPVLGRFED
FSKGIKAMLHALEKHSSLKPLVRSLAQITTLLYPGLAQSNFLSM
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcggcgcccccgcctcgacctcaggcagtggcggcgctggcaccaagacc
gtgtccgcctcgctgtggtgggaccccttcgtcgccctctgcgacgacctcgaccgcgcc
gccgcctccccctccgccgccgtctccgacgccctcgcggagcggatcaagggccaccat
gcgtggctccgcggggcggtctcgatgttcgggaagccgaacggcgcctcgagggccgcg
ctggacgccggccaggtcgccgtcggggagcaccgcctggccgtcaagcccgacctcaag
gaggccgcgctccgcgcgagcaagtccctcgacctggatgaggtgcagtcgtacatcctg
gtgaaacggtcttcagagagcgccccaacgacccgtgacgctgacccacaggagctcctt
cggctggtgtctctgcaatactaccttgagcgtcagtgtctgctcaagtgcattaggaga
atctttgttcatgccacatgcacagatgatgactctggttcaaccgacgccataaaacaa
gaggcctcactgttaggcagtgacgagatggagcagagattgctatccatcattaaagac
tcccttgcggctgcattttcggtgaaatcagcggctgatttgacggtttcttggctggaa
gaaagcttgattgagattaacctgatcctggacattctgtttcttgctatctgtgataac
ttctcaaggtgcaatggtgggctgtggatagctctgtgctcgctgtttagggatatgctc
tctggctcttatgatgttggaaagtttgccgtgtctgctgaagcaaagagatcatttcat
tatgctaaagctcagctactctttattctcgttgagactttggacctcgaaaatctcctc
cgaatggttcacgacgaagtctctttcagtggagggtattcccagtattctgttgctgat
attcttgagatggatattgaagtatcaagattgcctgaatttgaagtggaatcgggacca
ctacttcttgcttgggcagtttttcactgcctgctcctgtctcttcctggaaataatgcc
aacttggaaattgatcatgcatcttatgcccagcaggcttttgagctcgcaccctttaat
tatttacttggagttctttgctcaagcatcttcagagagtcagatggtcctgtttctggt
tttcgtgctgtactgagatctttcatttcagctttcatcgcttcatatgagatatcttat
cagacagaagacagttctcttggtgtgatactgaatattatatgtgaagtttatggtgga
gaggaatcactatgtatgcaattctgggacaaagatagttgtgttgatggtccaatcaga
tctgttcttcaaatgttggagaaagagtatcctttccaaataacagatctgcttcgcttc
ttatcagctgtttcttatgggacatggcctgctcaatgtgtatataattacctggagagg
atgaatgggctaacaacactgtatgcaactcctggcagtgtccctgatagtctgaactac
tgtgatcaaattgaaattcatcatccaatcagcattcctggtatggaaggcattacctta
ccccgtggaacacgtggttacattttgagaagtcttgaaggcaacgctgcattagttcgt
tgggagttcccacattcaggcgtttttattttgctcctcactttggcacaagatctatat
tcatgcaattatgtggaagcctgcgatataatggacttgctgtatcagatggtatcatca
aatcaggttctgtgctctgctttgctgcatgctgacaagtcactggctgttcaaaaatca
aagagtttgggccaaattggagaatatatcaggattgatattgttaaaatcctttgctca
tcagttttcaaatatgagcaagatggtaataatgccagcataatgtcgaaaaccttcagt
gtgttaacagaatttctgaagtgtgtcccataccatgtgtttgacgtggcgttagagtgc
ggcatcttcagctcacaattaaatgacccctcaagtgattggctactttctggtgcacta
gctagaatgctttttgccgcctctgaagaaaatggagactgttcatcacttaccacttca
ttgcttgattttgccattcaggttttgcggaaagcagccgccgctgatgacatgatatcg
ccgttcatcgttttttcagtgcaatacatcatggtcaatcatatgaactggaaacacaag
aagtatagtcgctggaagacaaccctgaaggtgtttgaattggtgaagagctgtattcaa
gtcaaaccattcttgtcaaagcttggtggcatcatttggcaaatgctactatatgattct
tctatccacaatgttctttggcataatgtgtgcacgtcgatgcaattattggaatcgcgt
ggcagctttagtaatggtgttgaagatattgaagatatacaacttgttctttgttgtgga
cttgatattatatttttcatgctgtccaacttaccagaggacttgatgccagttgcacct
tttgttactttggttttgtcatcttcattgaagcccttacctttcatcacagctacaata
tcgtctatgtccttccagaattctgctttacaagttagtgcagctagagcattatcagta
ttgtgcttcactgcccacagagtccaacctcaactcatggaaaatggtagctttcttgtt
gatggttcagagatttggaaattgcaagcaagtatttcccaaattcttgacaaggaagat
gatactaataattgtttgatcgtggctatattcagccttctgacttctgttgctcgctat
cagcctgctctttttgtttcactgacagaggagaatgcgatgatacaagctgatcatagt
aattctgcaaattctcaaaccaatggttcttctaccctcaacagttcaagaagtaattcg
agacttgttgagcaaatgttgggatacattgaaaattcgactgagtttatgaatagttct
ccttctctgttacttagcatccttgacctactcgaggcattatgggaaagtggtgtgcaa
ttcatatgcatattagataagctgagaagttctagaacgttctgggagagcttatcatgt
tgtattcgtgccacctttgatcattgccctgttgacagtgttgacactgtcgatgagaaa
ttttcttcgaggtataattgccaggctaaaattttcaagatcatgtcacatgagttgttc
ttgaaagggagattacttgtggaagcaaaaacttctaatcctgtagcagatggtacaaag
gggcaaaaagaaccttctgcatcttatccaagcaacgtagtgtgcaaatggtttgatagt
gctctcttggaagattttatcaatcatttgtcgagcaacggataccagaaggatcttttt
catcgtgccaaggtagcttcatgcgtttgcatcatccgtctaataacaaagttgtccagt
ggtgatactgccagcttgtctttctcggcagtgaagaagattcagctaatctctagcaaa
ttgttacaacaccgtgcattcatagctctgctgtcgcagtatgccctgcatggctacagt
ggtgagcaagaacttactagtttggtaatcaatgatctttactatcatatacatggagaa
cttgaaggtcgtcagattactcctggtccctttcaggagctcttgtgtttccttctggag
tttaagttttttgaatgcaatgctacagagcaaccacatagcgccttcccagcagtcagt
ggcaatgttttatttgatgttgcacacactcgtgatgatcttggagttaaattttggaat
cattcagattggaaaccctgcaaagaagtagctgaaaaaatgctggatattatgcataaa
gcaaatctgatgaagtgtcatgctgatgcaaagctttgtacattaaggtccttcataaca
tttctatctgtctacactggaacaagttccagtaatgaactcaccttacctgatggaggg
atttccgcaacagctatggaatcagcaattagatgtgcatgcaaatatttgcagtcaact
gtagattctctatttcctgaagtcgatacgaatgaggttttgtttcccctattgtctggg
caagtggacttactgcttactcttaccaggttctcatttcaccaagctaagcaaaccaag
agctatgttcatctctatccagttattgtacttcttatgagaacctcaggtgccagcaca
tcatttttagttgatctcgtgccatcaagtcctgctcttaggaaaccagtgaagtccctc
cttgttctgattctgtccttatttgaattcatttatggcaaggatgccgtgaaagatgga
tcaggtgatgctaatctgtttggtgaatcatccattataagtacgaggttgttacctgta
ctctgcaaattggctgagaatagggaatattctgatcttgctgttggatcaatggactta
ctattgaagggctttataccccccaatgtatggttgccaattctacaaaagcatttccgt
ctccaggctatactgcataaatgtcagaatggtgcaatattgtccactcaagtaattttg
aatttcctcttgaccttggggcggacaaaggatggtgctaaaatgcttcagtctgcaaac
atttttgctttcttgaaggtacttctaagtaagttatctctggatgactcctgtttcaga
aattctttgagcagccaagcgaaggatgtgcatatgtggagtttggctcttgctatagtc
gcctctctcaaccattgtatggatgatgatgtttctcgtagcagtgttgcgaacggtact
gtcagcttcctttcaggacaggttccgctgatgtccgcttatctatctgcacaaagtgtt
aatacacatcagaacaagaaaagggcggtgttgcaacagtcgcagacatcactttcagct
ctgagtttaactgagaatatcctctcacttctgtgtgttctagcaaaatatcattttcca
cgggacactggtatgatgcaagtagattcagaattaagagagattattatccacctgctt
gcttttattagcagaggaagtgcaaggactggcgattcaccaaactggaacccatcattt
ttttgtcctcctattgctaaggaagaagtggtgcttcatgaagatccaccactcatcagg
agcaaacatggatggttcagacttgctgcaagcagttctctttccactgcagctatttct
gctccttccaatgcagcattatctctggtgatcagagacaaaaatagtggagattctggt
tctgtgaaacagactcgttttaccgagatggtagctgtgcagatttacagaatagctttc
cttattatgaaattcctgtgcagtcaagccaaagaggcagtaaaaagggcaggagaatta
gaatttgttgatcttgcacattttcctgaacttcccatgccagatattcttcatggtctg
caggatcaagtggtttctatcgttacggaagtactgggggcaaatggatcgagtgccctc
agcggggagaccgatagggtatgccgtcttctgttggtgaccctcgaggcatcactctac
atggaactgtgcgtgtcccagtcttgcggcatcaggccagtgctgggccggttcgaagat
ttctccaagggaattaaggcgatgcttcacgctctggagaaacattccagtttgaaacca
ttggttaggtcacttgctcagattacgacactcctgtatcctgggcttgctcaaagcaac
ttcctcagcatgtaa
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