Triticum dicoccoides (wild emmer wheat): 119341189
Help
Entry
119341189 CDS
T07278
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03030
DNA replication
tdc03410
Base excision repair
tdc03420
Nucleotide excision repair
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119341189
03410 Base excision repair
119341189
03420 Nucleotide excision repair
119341189
03430 Mismatch repair
119341189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdc03032
]
119341189
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119341189
DNA replication proteins [BR:
tdc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119341189
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119341189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_30
RCF1-5-like_lid
AAA_19
RuvB_N
nSTAND3
AAA_assoc_2
AAA_5
PTCB-BRCT
BRCT_2
AAA_16
AAA_24
AAA_18
Sigma54_activ_2
Gp44_lid
AAA_14
AAA_17
RsgA_GTPase
Zeta_toxin
NTPase_1
Mg_chelatase
RNA_helicase
AAA_2
AAA_33
TsaE
Motif
Other DBs
NCBI-GeneID:
119341189
NCBI-ProteinID:
XP_037468957
LinkDB
All DBs
Position
7B:534713604..534725326
Genome browser
AA seq
1056 aa
AA seq
DB search
MSSDIRKWFMKPHDKNAGAAKPSAAGAAAPGAAKKPVLSIPEKAATSSVPGNQDASARRK
TSKYFAPKTEKDADVAEKSSSKRKLQKSSEDLEDDIKPFAANKALKDEEDDDDDFVVPSK
KKTPVKPPPLKKLKAASNDDDQDERMDEDAETPSKAAGRGRGRGRGGRGAGAAHGKTTSH
DDDGGEDRMDEDAKTPSKAAGRGRGRGRGRVGRGGGTAHGKTTTGLDDDGEEDRMDEDDK
TPSKAAGRGRGGRGAGATPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLAGLT
FVISGTLDSLEREEAADLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLT
EDGLFDMIRKSKPAKAPVNKHEGNSNSEKLQKSQTKSSPVKPERRAVDQVGTMGKSTPSK
SNKESNSTNNQKVKVVDRGSLQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWENQFLHSG
QKGKGKKQVDGGAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEK
GVGGSTSNSIKELISNATLNYSDNRIKKPKAVLIMDEVDGMSAGDRGGVADLIASIKISK
IPIVCICNDRYSQKLKSLVNYCLLLNFRKPTKQQMGKRLMEIARKEGIQAQENAMEELAE
RVHGDIRMALNHLQYMSLSQSVVKYDDIRLRLNSSSKDEDISPFTAVDKLFGFNGGRLRM
DERIDLSMSDPDLVPLIIQENYINYRPSAVGKDDSGVKRMNYLARAAESIADGDIVNVQI
RRYRQWQLSQAACLASSIVPAALMHGNREVLEAGERNFNRFGGWLGKYSTTNKNKRLLED
VHSHILASQQANLDREALRLDYLTLLLRQLTDPLKTMPKEEAVQKVVEFMDTYSLSQEDF
DTLVELSKFKGHPNPMDGIQPAVKSALTKAYKQGSSSRVVRSADLINIPGMKKTLKKRVA
AILEPLDESLPEETGVASAEGDEEELSDAENDDELVPGDSKPKLDLQSDNKKGIQVQLNL
KSNGNGSSAKKAPAARSKTPGSAGKAVGGSGGKRKR
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacatcaggaaatggttcatgaagccgcacgacaagaatgcgggtgcggcc
aagccctctgccgccggcgccgccgcgccgggtgcggccaagaagcctgtgctcagcatc
cccgagaaggccgcgacatcttcggtgcctggtaatcaagatgcttcagctagaaggaag
acaagcaagtactttgcacccaaaacagaaaaagatgctgatgttgctgagaagagttct
tctaaaagaaaacttcagaaaagcagtgaggaccttgaggatgacatcaagcctttcgca
gcaaacaaggcccttaaggatgaagaagacgacgacgatgactttgtggtgccttcaaaa
aagaaaactccagtgaagccaccaccattaaagaagttgaaggctgcatctaatgatgat
gaccaggacgaaaggatggatgaagatgccgagaccccttccaaagcagctggaagggga
agaggaaggggaaggggaggaagaggagcaggagcagcccatggaaagactactagtcat
gatgatgatggtggggaggacaggatggatgaagatgctaagaccccttccaaagcagcc
ggaaggggaagaggaaggggaaggggaagggttggaagaggaggaggaacggctcatgga
aagactactactggtcttgatgatgatggtgaggaggataggatggatgaagatgacaag
accccttccaaagcagctggaaggggaagagggggcagaggagcaggagctactcctggg
ggaagaggtagaggagggggtgggagaggtttcatgaattttggtgaaagaaaggatccc
cctcacaaaggggagaaggaagtcccagagggtgcccctgactgtttagctggtctgaca
tttgtcataagtggtacccttgacagtcttgaacgggaggaagcggctgatctaataaag
cgttacgggggacgtgttaccggttcaattagtaaaaagacgagttacctattggctgat
gaagatattgggggagtgaaatctaataaagcaaaagatctgggcgtcccgttcttgact
gaagatggtttatttgatatgatccggaaatcaaagcctgcaaaggctcctgtaaacaaa
catgaaggtaacagcaattcagaaaagctacagaagtcacagacaaagagctctccagtt
aaacctgaaagaagagctgtcgatcaagtcggtaccatgggcaagagtactccctcaaag
agtaataaagaaagcaactccactaacaatcaaaaggtcaaggttgttgaccgcggttct
ttgcaatggacagagaaatatcggccaaaagttccaaacgacatagttggcaaccaatca
atggttaaacaacttcatgattggttgaaaagttgggagaatcaattccttcattctggc
caaaagggcaaaggaaagaagcaggtcgatggtggagctaaaaaagctgtattgctgagt
ggacctccaggtattggtaagactacaactgcaaaagttgttagtcagatgcttggattg
caggccattgaggttaatgcaagtgatagccgtggtaaagcagactccaagattgagaaa
ggtgttggggggagcacatcaaattctatcaaagagcttatcagcaatgctactctgaat
tatagtgacaaccggataaagaagcctaaggctgtactcatcatggacgaagttgacggt
atgtctgctggtgatagaggtggagttgctgatcttattgccagcatcaagatatccaag
attcctatagtttgcatttgtaatgatcgttatagccagaagctgaagagccttgtaaat
tactgtttgctactcaacttcaggaaaccaacaaagcagcagatgggcaagaggttgatg
gagattgccagaaaagaaggcattcaagctcaagagaatgcaatggaagagcttgcagaa
agagtacatggggatattcgcatggcactcaaccatttgcaatacatgagtctctcccag
tctgtggtcaaatatgatgacataaggttgcgtcttaatagtagctcaaaagatgaagac
atctctcccttcacggctgtggacaagctattcggtttcaatggtgggagactaaggatg
gatgagcgaatcgacttgagcatgagcgatcctgatttagttccccttattatccaggaa
aattatatcaattatcggcctagtgccgttgggaaggatgacagtggagttaaaagaatg
aattatcttgcccgtgccgctgagtctatagcggatggtgatattgttaatgtgcaaata
agaagatatcgacagtggcagctgtcccaagctgcttgtttggcttcatcaatagtacct
gctgctttgatgcatggaaatagagaagtccttgaagcaggtgaacgaaactttaataga
tttggtggatggttgggcaagtactcaactactaacaaaaacaaaaggctactggaagat
gtccatagtcatattcttgcatcgcagcaagctaatttggatagggaggcgttgaggctc
gactatctcactcttctcttgagacagttgactgacccactgaagacaatgcctaaggag
gaagctgtccaaaaggtggtggagtttatggatacctactctttaagccaggaagacttt
gacacgcttgttgaattatctaaatttaagggccatccaaatcctatggatggtattcaa
ccagctgttaaaagtgccttgacgaaggcatacaaacaaggaagtagctctcgtgttgtt
cgatcagcagatctaataaatatccctggcatgaaaaaaactttaaagaaacgagtggca
gcaatcctggagccattggatgagagtttgcctgaagaaactggagtagcatctgcagaa
ggtgatgaagaggaattgtctgatgctgaaaatgatgatgaacttgtgcctggtgactcg
aagccaaaactggacctgcagagtgataataagaaaggaattcaagtgcagctcaacctg
aagagcaatggcaacggctcgagtgcaaagaaggcgccagcggcaagatcaaaaactcct
gggtctgcagggaaggccgtcggaggctcaggcgggaagcggaagaggtag
DBGET
integrated database retrieval system
