KEGG   Triticum dicoccoides (wild emmer wheat): 119341471
Entry
119341471         CDS       T07278                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tdc04121]
    119341471
Enzymes [BR:tdc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119341471
Ubiquitin system [BR:tdc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119341471
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 Rtf2 zf-rbx1 RING_XB3-XBAT31 Prok-RING_4 TerY_C Zn_ribbon_6 zf-Nse Sina_RING zf-RING_4 TRAF3_RING zf-RING_10 zf-RING_11 DUF7560 PUMA zf-Vps39_C
Other DBs
NCBI-GeneID: 119341471
NCBI-ProteinID: XP_037469239
LinkDB
Position
7B:complement(754907539..754909674)
AA seq 199 aa
MGTVGAWRRAQDGSVTTGEAVVDLDGSPIAGGGGGQHEASITAGTRASPIDVEALGDEGR
SRAKIRRRVDVVDLEADDDHEGCGDARTTFNRLSGNKRRKVPPVISLSPDREERSSNQRN
STVRVSRLSANAAPKEPTFTCPVCLNKMELPSATSCGHVFCEKCIKAAIKAQKKCPTCRK
RLGPKSHRRVYLPATADQV
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggtacggttggcgcttggaggcgagcacaggatggttccgtcactaccggtgaagcc
gtcgtggacttggatggatcccccatcgccggtggcggcggcggccagcacgaggcctcg
atcaccgcgggcacacgggcctcgcccattgacgtcgaagcgctaggcgacgaggggagg
tcgagagctaagataaggcgccgtgtggatgttgtggatctggaggcggatgatgatcac
gaaggttgtggtgatgcaagaacaacatttaaccgtctcagtgggaacaaaaggcggaag
gtcccacctgttatatccctttctccggacagggaagaaagatccagcaatcagcgaaac
agcacggtccgagtcagtagactaagtgccaatgctgctccaaaggaaccgacgttcact
tgcccagtgtgcctgaacaagatggagctgccgtccgcgacgagctgtggccatgtcttc
tgtgagaagtgcatcaaggcggccatcaaggcccagaagaaatgccctacttgtaggaag
aggctagggccgaagagccaccgccgagtttacctccctgcaactgctgatcaagtctga

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