Triticum dicoccoides (wild emmer wheat): 119341696
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Entry
119341696 CDS
T07278
Name
(RefSeq) uncharacterized protein LOC119341696
KO
K24738
rabconnectin-3b
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
119341696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119341696
Membrane trafficking [BR:
tdc04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
119341696
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_EML
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
119341696
NCBI-ProteinID:
XP_037469458
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All DBs
Position
7B:complement(461893571..461904848)
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AA seq
1253 aa
AA seq
DB search
MVPVVEVAAVEGDSPRRLSVSSLSSFASAEAPDGTVEAVALSDDGKVVALVLKTSCLLKC
VVEGSVLGEVSLANTSLCKEGETGVKGCLSGGFFLHGGEWGGPHSEEGTVVRSLVLWSSN
GGAMVYKVAVGTPPLFGCEAVCEVPGISSEQGEMPVIQYCQMGNCLIRMESRPYKIGGSL
FWKPFISIWSMDQLDLSIATNTESPPLSKVLGEGSLQGEEFRSELSNSLPKSDNGVEISS
QICSAYINGSGKHGRTVSSSMVLSEDSYAPYAIVYGFHNGDIEVIRFLNLLPAAQFGSGG
VYPHISERFFLGHKGAILCLAAHHMHAHSDSRSFRRALISGSLDCTIRVWDLDAGTLLSV
MHHHVAAVKQIILPPACTHQPWDDCFVSVGEDGLVALVSLQTMRVERMFPGHSCYPSMVA
WDGVKGYIACLCRSLNSCNDVGSILYIWDMKTGARDRIIRGTTSQSVFEHFCRGISKNSV
TGGILGGTTSASSLLVPILKGTQSPANRNGMNISSIPTNHHSAADSIALSVSAAHDVKGK
TPAPVDRDNSAYSSGKSGSAQITNKRRKYPIKCSCPYPGIASLRFDLTAIMSTQGMSNSN
SDRQLRDHLCGDANKETTPPGALNNTSGILEMDSPSRESLEGQLLRFSLCFLHLWDVDCE
LDKLLVDEMQVCKPEGCHIATGVVGDRGSFTVMFPGKEATLELWKSSAEFCAMRSLSIVS
LAQRMITLSRSCTNASSALAAFYTRHFAEKVPDIKPPSLQLLVSFWQHPSEHVRMAARSL
FHCSAPRSVPQPLRVQRNKIPDHLSLSDHMDKLIPEMQSASISSYGQLKVDGENLDRDDD
DTSQIISWLESFENQEWLSWIGGTSQDAVASNIIVAAAFVVWYPSIVKVKLAKLVVNQLI
KLVMSMNDRYSSTAAELLAEGMESTWKACLGTDITHFLSDVLFQIECLSSAPSSNVIYKT
AVAVTMREALVGTLLPSLAMADIMGFFGVIESQIWATSSDSPVHVVSLKTLIRVLRGCPK
ALAPYLDKAISYILHTMDPSNLIMRKACIISSMMALREIARVFPMVALNETMTRLAVGDA
IGEIHTATIRVYDIESVTKIRILDACGPPGLPSFLKGPSDTTTTILITALSFSPDGEGLV
AFSENGLMIRWWSLGSAWWERLSRSLTPIQCTKLIYVPPWEGFSPNSARLSIISNILGHD
KHQNSESKTRELDEADNLKLLLHNLDLSYRLHWVGGKTIKLTRHDQDLGTFQL
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccgtggtggaggtcgcggccgtcgagggtgactcgccgaggcggctcagcgtg
agttccttgtctagctttgcatctgcagaggcgccggatggtacggtggaggccgtggcg
ttatcggacgacgggaaggtcgttgccttggtgctgaagacgagctgtttgttgaaatgc
gttgtcgagggttccgtgctgggtgaggtgtctctggcgaacacttcgctatgcaaggag
ggggaaacaggagtcaagggctgcctttctggagggttttttctccacggaggggagtgg
ggaggccctcactctgaggaaggcactgtggtcaggagcttggtgttgtggagcagcaat
ggtggtgccatggtgtacaaggttgctgttggtactcctccattgtttgggtgtgaggct
gtatgtgaagttcctggtatttcatccgagcagggagaaatgccagtaattcaatattgc
cagatgggcaactgtcttattaggatggaatcccgtccgtataagattggtggttccttg
ttttggaaaccgttcatctccatatggtctatggatcaactagatttgagtattgcaacg
aacacagagagcccacctttgagcaaagttcttggagaaggcagtcttcagggagaagaa
tttaggtcagagctctctaattcactacccaagtcagacaatggagtggaaataagttca
cagatatgctcagcatacatcaatggatcgggaaagcatggacggaccgtatcttcttcg
atggtactttccgaggattcttatgctccatatgccatagtttatggtttccataatggt
gacatagaagttattcgatttctcaatctgttgccagcggcacaatttggtagcggaggg
gtttacccacatatttctgaaagatttttcttggggcacaagggagcaattctttgcttg
gctgcacaccacatgcatgcccactctgactctagaagctttcgacgagcactcatatcg
gggagtttggattgtacgattcgtgtctgggatcttgatgccggcaccctcctttctgtg
atgcatcaccatgttgcggcagttaagcaaataatactaccaccagcttgtactcatcag
ccttgggatgattgttttgtttctgttggagaagatggccttgtagcacttgtttctctt
caaaccatgcgtgtcgagaggatgtttcctgggcattcttgttatccatcaatggttgct
tgggatggagtaaaagggtacattgcttgtttatgccgtagtctgaactcttgtaatgac
gtgggcagcatattgtatatatgggatatgaaaacaggtgctcgagaccgaattattaga
gggacaacatctcaatcagtatttgaacacttctgtaggggcatttccaaaaattcagtt
actggtggcatcttgggagggacaacttcagcatcttccttacttgttccaattttgaaa
ggcacccagtctcctgcaaatagaaatgggatgaacatctcatctataccaacgaaccat
cacagtgctgcagattccatagctttgagtgtctctgctgcgcatgatgtgaaggggaag
acaccagctccagttgatagagataattctgcatatagttcaggaaaatctggctctgcc
cagataacaaacaaaagaagaaagtaccccataaagtgctcatgtccatatcccggcatt
gcaagtctgagatttgacctcactgcaattatgtccacacaaggcatgtcaaacagcaat
agtgataggcagttgagagatcatctttgtggtgatgctaacaaggaaactacgccacct
ggagctttaaataatacttccgggatcctagaaatggatagcccatctagagagtcattg
gaagggcaattacttcgatttagtctctgttttctgcatttgtgggatgttgattgtgag
ctggacaaattacttgtggatgagatgcaagtttgcaagccagaaggttgtcatatagct
acaggggttgtaggggatagaggttcgtttacggtgatgttcccagggaaagaagccact
cttgagctttggaagtcctctgctgaattttgtgctatgaggtcgctgtcaatagtttct
cttgcccaacgcatgatcacattatctcggtcttgtacaaatgctagcagtgccttggca
gctttttatacaagacactttgctgagaaagtcccagatataaagcccccatccctccag
cttctggtgagcttttggcaacatccttctgaacatgtgcgaatggctgcccgctcctta
tttcactgctcagctcctcgctctgttccacaacccctccgtgtacagagaaataaaatt
cctgaccacttgtctttatctgatcatatggacaagcttatcccagagatgcagagtgcc
tcaatatctagttatggacagttgaaggtggatggtgaaaatcttgacagggatgatgat
gatacttctcaaataatctcatggctggaatcatttgagaatcaggagtggctatcttgg
attggaggaacaagccaggatgcagtggcatcaaatatcattgttgcagctgctttcgtt
gtttggtacccaagcattgtgaaagttaagcttgcaaagttggttgtcaatcaactaatc
aaattagttatgtcgatgaatgatcgttacagttcaactgcagctgaacttctagcggag
ggaatggaaagcacatggaaagcatgtttggggactgacatcactcatttcttgagtgac
gtccttttccaaattgagtgtctaagtagtgcaccttctagcaatgtcatctataaaact
gcagttgctgttacaatgagggaggcattagttggcacccttctaccaagcttggctatg
gctgacataatgggattttttggtgtaatagaaagtcaaatttgggctacttcatctgat
tcacctgttcacgtagtctcactcaaaactctcatccgagtacttcgaggctgtccaaag
gccctggctccttatcttgacaaggcaatcagctatatcctacacacgatggatccaagc
aatttaataatgcgtaaagcttgcattatcagctcaatgatggctctaagagaaattgcc
cgtgtatttccaatggttgctctcaatgagacaatgacaagattagctgttggtgatgct
attggagagattcacactgccacaattcgtgtttatgacatagaaagtgtcacaaaaata
aggattctcgatgcatgtggaccaccaggtcttccaagctttctcaaaggaccatcggat
acaacaacaaccatactgataacagctttgagtttctcaccagatggagagggccttgtc
gccttttcggagaacggattgatgattagatggtggtctcttggttcagcctggtgggag
aggctaagcagaagccttactcctattcagtgcacaaaacttatctatgttcctccatgg
gaaggattttcacccaactcagctcgcctaagtattatttctaacatcttgggacatgat
aaacatcaaaattcagagagcaagacgagggaactagatgaggctgataatctaaaactg
ctgttacataatcttgacctttcttaccgccttcattgggttggtggaaagaccattaaa
cttacaaggcatgatcaggacctgggtacatttcagttgtga
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