Triticum dicoccoides (wild emmer wheat): 119341911
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Entry
119341911 CDS
T07278
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119341911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119341911
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119341911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
119341911
NCBI-ProteinID:
XP_037469661
LinkDB
All DBs
Position
1B:470806121..470813274
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AA seq
1428 aa
AA seq
DB search
MPVPLVGAVATRTRSRRLAMQPPAPEEAPRAKRRRKGATRADADGGGGSKGADSSKSETR
PNRRGRPPRASVKSKEAEAEADAPACGDWVEVSRGDGYDGGGRRGDDASGDDNGESRADE
ACGIGQGSHEHHSAASGNRINEHQGSGAVNGSNSCHVMNEVVVSGDAGGLKGRGGEGGGL
GGGFHVDEEHMNEDDTTVGCGNRELPTADAMMDDEAAASEDDFGDYYDDEMMEERLVADL
IRAYSNGGNLEASNGAYGNGGDLEEAEDEMGFTDDGDDDDFMHDADECGMSEPINDDAKA
PINDDAKAGTQDPVDHKVVAGEVRCHEEEEEEDVIKDEVETKREGATGFNQGRSHIEILD
SDEEVKVLNDASKASKRKPLPRKKEPVVPCVAWRTRSLWGLKQDRLSYNAYFEELSDEPE
EEDDSEVELDDEDDDSADDDNSASHDSEVELEEEDAKKKAKEEEEAEMRKRKKEIASSSA
KIRAGPFPLYTNTGKRIQKATPHRCNNSKPRRRIQTHHRIDSSDDEIIDHTVADGFKWEV
DKKPGIQPLNFDKDGSEGPVGNDITQHQKQTHFTWDLERRKRLKLETTTKERQLFERHLD
SDSSPSSSDQNKRHGDDSKTEKEKKHLASKSGKSAKKSSGSGSKTLKRQSLLKLLMDKMS
GDKDGGFSPFDQHPQFDYNFKDPHPLVFSFGTENSTPADIPEQNAKENMLWGDFDFALES
ENIGTYYDDEHQGETNVLDLGLPSKTPCSRGKHEFIIDDQIGIRCKYCSLVNLEIRFVLP
SMVSNYTEKTPWRNGSYLKEALMYHDLCEQAGSVDGQSQDFHLYGTVWDLIPGVITSMYQ
HQREAFEFMWTNLVGDIRLDELKHGAKPDVVGGCVICHAPGTGKTRLAIVFIQTYMKVFP
DCRPVIIAPRGMLFAWEEEFKKWDVNVPFHIMNTTDFSGKEDRDICRLIKKEHRTERLTR
LVKLLSWNKGHGILGISYGLYMKLTSEKKSGCTEGNKVRSILLENPGLLVLDEGHTPRNE
RSIMWKTLGKVKTEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLTEKKVGRRHYVSK
KRQDKFSDKYEKGVWASLTSNVTDDNAEKVRSILKPFVHIHNGTILRTLPGLRESVIVLK
PPPLQKSIIRKVENIGSGNNFEHEYVISLASTHPSLVTAINMSEEEASLIDKPMLERLRS
NPYEGVKTRFVIEVVRLCEALKEKVLIFSQFIQPLELIKEHLSKLFKWRVGKEILQMDGK
IQPRYRQTSIEVFNNPDSDAKVLLASTRACCEGISLTGASRVVLLDVVWNPAVGRQAISR
AFRIGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFSQEDEFNNVRNMLSKAEMDH
CSKLISKDKVLEEMTSHDQLKGMFLKIHYPPTESNMVFTYNQIAPELS
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgccgctggtgggggcggtggcgacgcggacccgatcgaggagactggcgatg
cagccgccggcgccggaggaggcgccgagggccaagaggaggaggaagggggcgacgagg
gcggacgccgacggcggcggtgggagcaagggcgccgactcctccaagtcggaaacgaga
ccgaatcgtcgtgggcggcccccgcgggcctcagtgaagagcaaggaggcagaggcggag
gcggatgcgcccgcctgtggagactgggtggaggtgtcccggggcgatggctatgacggc
ggtgggcggcgaggtgatgatgcttctggcgatgataatggcgaatctcgcgccgacgag
gcatgcggcattggccaggggagccatgagcatcacagtgccgctagtgggaatcgaatc
aatgagcatcaggggagtggggcggtcaatggttcgaattcgtgtcatgtgatgaatgag
gtggtggtatcaggcgatgcaggggggctgaaaggtcgtgggggtgagggaggtgggcta
ggtggtggttttcatgtggatgaggagcacatgaatgaagacgatacaacagtaggctgt
ggaaacagggagctgccgacggcggatgcgatgatggatgacgaggctgcagcgtctgaa
gatgactttggagattactatgacgacgagatgatggaggaaagactggttgcagatctg
atccgtgcttacagtaatggtggtaatttggaggcaagtaatggtgcttacggcaatggt
ggtgatttggaggaagccgaggatgagatgggattcactgatgatggtgatgatgacgat
tttatgcatgatgcagatgaatgtggcatgtctgaaccaatcaacgacgatgctaaggcg
ccaatcaacgatgatgctaaggcgggaacgcaggatccggtggatcacaaggttgttgct
ggtgaggttaggtgccatgaggaggaggaggaagaagatgttattaaggatgaggtggag
actaagcgagaaggagctacgggctttaatcaagggagatcgcatatagaaattcttgat
tcagacgaggaagtaaaagtgctcaatgatgccagtaaggcctcgaagaggaaaccgttg
ccgcgaaaaaaggaacctgtcgtgccatgtgttgcatggaggactcggtcattatggggg
cttaagcaagataggttgtcgtacaatgcgtattttgaggagttgtccgatgagccagaa
gaggaggatgattcagaagtggaactggatgacgaggatgatgacagtgccgatgatgac
aatagtgccagtcatgattcagaagtggaactggaagaagaggacgcaaaaaagaaagcg
aaagaggaagaagaggccgaaatgagaaaacgcaagaaagaaattgcctcatcttcggct
aaaataagggctgggccttttcctctttatacgaatacagggaagagaatacaaaaagca
accccacacaggtgcaacaactcaaagccacggaggaggatacaaacccaccatagaatt
gactcatctgatgatgagataattgatcatactgtagcagatggtttcaagtgggaagtc
gacaaaaaaccagggattcaaccactgaactttgataaagatggcagtgagggtccagtg
ggcaatgacattacacagcatcagaagcagacacattttacttgggatcttgagaggagg
aaaaggctgaagcttgaaacgacgactaaggaacgtcaattgtttgagcgacatttggac
tcggactctagcccatccagttcggatcagaataaaaggcatggcgatgatagcaaaact
gagaaggaaaagaagcatttggcatcaaaatctggaaaatctgccaagaaatccagcggt
tcaggttcaaaaacgctaaagcgacagtcacttctgaagcttctgatggataagatgagt
ggcgataaagatggaggattctctccttttgaccagcatcctcagttcgactataatttc
aaggatcctcatccattggtattctcatttggcactgaaaattccacaccagctgacata
ccagagcaaaatgctaaagaaaatatgctgtggggtgactttgactttgctttagagtca
gagaatattggaacctactatgatgacgagcaccaaggagagaccaatgtgctagatctt
ggacttccttctaaaacaccttgttctcgagggaagcatgaatttattattgacgaccaa
ataggaatcagatgcaaatactgctccttggtaaatctggaaatcagatttgttttacca
tcaatggtctcaaattacacagaaaaaactccttggcgaaatggatcttatttgaaggaa
gcgttgatgtatcatgatctttgtgaacaagctggaagtgttgacgggcaatctcaagat
ttccatctatatggaacagtatgggatctcatccctggtgtcattactagtatgtatcag
catcaacgcgaagcatttgaatttatgtggacaaatctagttggtgatattaggcttgat
gagctgaagcatggagctaaacctgatgttgttggaggatgtgtgatctgtcatgcccca
gggacaggaaagacacgtttagctattgtttttatccagacatatatgaaggtatttcca
gactgtcggccagttattattgcacctcgcgggatgctgtttgcttgggaagaggagttc
aaaaaatgggacgtcaatgttcctttccatataatgaacactacagatttttcagggaaa
gaagacagagacatatgtaggctaataaagaaagagcatcggacagagaggttgacgagg
cttgtaaaactgctttcatggaacaagggtcatggtattcttggaataagttatggtcta
tatatgaaacttacatcggaaaaaaaatctggctgcactgaagggaacaaagtaagaagt
attcttctcgagaaccctggtttgcttgtgctagatgaaggacacacacctaggaacgag
cgcagtattatgtggaagacattgggaaaagttaaaactgagaagcgcataattctatca
ggaactcctttccagaacaattttcttgagctttataatatactctgtttggtaaggcct
aggtttggtgaaatgtttttgactgagaaaaaagtgggcagaaggcactatgtctcaaag
aagcgacaggataagttttctgacaaatacgaaaaaggagtttgggcttcattaactagt
aatgtaactgatgataatgcagagaaagtcagatcaatactgaagccatttgttcatatc
cataatggcaccattcttcgaactcttccagggctcagagagagtgtgattgttctgaaa
cctcctcctcttcagaagagtatcattagaaaggtggagaatattgggtctggtaataat
tttgagcatgaatatgttatttccttagcttcgacacatccttctcttgtgactgccatc
aacatgtccgaagaggaagcttcacttattgataaacctatgcttgagagattaaggtca
aatccctatgaaggggttaaaacaagatttgtaattgaagtcgttcgtttgtgtgaagca
ctgaaagaaaaggtattgatctttagtcaatttattcagccactagaattgataaaagaa
caccttagcaagcttttcaaatggagagtagggaaagagattctccaaatggatgggaag
atccaaccacgatatcgccagacttcaattgaagttttcaataatccagatagtgatgcg
aaggtgttacttgcatctacaagagcttgctgtgaagggattagcctaaccggagcttca
agagttgttcttctagatgtggtttggaatcccgctgtgggaaggcaagctatcagtagg
gcatttaggataggacagaagaaatttgtatatacatacaatttaataacttatggaaca
ggtgaaggtgacaagtatgatagacaagcagaaaaggaccatttgtctaagttggtcttc
tctcaagaggatgagttcaataatgtcaggaacatgctatcaaaagctgaaatggatcac
tgttctaagttaatatctaaggataaagttctggaggagatgacctcccatgaccagcta
aagggcatgttcttaaagatacactatccaccaactgagtcaaacatggttttcacttac
aaccagattgcccccgagttgagttaa
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