Triticum dicoccoides (wild emmer wheat): 119341921
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Entry
119341921 CDS
T07278
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119341921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119341921
Enzymes [BR:
tdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
119341921
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
Other 90S particles
119341921
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
119341921
NCBI-ProteinID:
XP_037469667
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All DBs
Position
7B:complement(633702984..633708157)
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AA seq
277 aa
AA seq
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MGRRYSAKGKKKRKLEDGATSRDDDAAELPPPEDDEGKVEEDVTEEDETVEVVAEGIPVL
PRPVDGRKRPRAIFVLERACLEVGKVGKTMQILNSDDHANYLRKHNRNPADYRPDIIYQA
LLAIFDSPLTKAGRLQAVYVRTEKGVLFEVKPNVRLPRTPKGFCGLMSQLLQKLSITALG
RREKLLNLIKNPVTQYLPVGSRKIGLSYSADKSVELNDYVAECSDDEALVFVVGAMAHGK
IDNEYTDEYIRISSHPLSAASCLARICTALEQKWNIQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggggcggcggtactcagcgaagggaaagaagaagaggaagctcgaagacggcgcgacg
tcccgtgacgacgacgcagcggagttaccaccaccggaggacgacgaagggaaggtagag
gaggatgtgacggaggaggacgagaccgtggaggtcgtagcggaggggattcccgtcctg
ccccggccggtagatgggaggaagcggcccagggcgatcttcgtgctcgagagggcctgc
ctggaggtcggcaaagtcggcaagactatgcaaatcttgaactcggacgatcatgcgaat
tatttgaggaagcacaatcggaatcctgctgattataggcctgatatcatttaccaggct
ctattggcaatatttgatagccctctaactaaggctgggaggttacaagctgtttatgta
aggactgaaaagggggtgttatttgaggtcaagccgaatgttcgcttgccacgcacgccc
aaaggtttttgtgggttgatgtcacagttattgcaaaagttgagcattactgctcttggg
aggcgtgagaagctgcttaatcttattaaaaatcctgttacccagtatctacctgttggc
tcacggaagataggcctttcatatagcgccgataagtcagttgaactgaatgactatgtt
gctgaatgcagtgatgatgaagcccttgtgtttgtggttggtgccatggctcatggaaag
attgacaatgaatacacagatgagtacatacggatttccagccacccactcagtgctgcc
agctgtttagctagaatatgcaccgctctggagcagaagtggaacatccagtga
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