KEGG   Triticum dicoccoides (wild emmer wheat): 119345009
Entry
119345009         CDS       T07278                                 
Name
(RefSeq) spliceosome-associated protein 49-like isoform X1
  KO
K12831  splicing factor 3B subunit 4
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119345009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119345009
Spliceosome [BR:tdc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119345009
 Complex B
    119345009
 Complex C
   U2 SnRNP specific factors
    119345009
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 119345009
NCBI-ProteinID: XP_037471157
LinkDB
Position
1B:complement(506273977..506276887)
AA seq 189 aa
MARNPGCAVYIGNLDEKVSERVLYEILIQVGRVVDLHIPRDKETSRPKGFAFAEYETEEI
AQYAVRLFSGLVRLHNRTLKFAISGQDKASSNVNVPVTPKMNPIPLSNPPQSMRFGDTPV
SQHRVINGRIAGHGVSPNHSYDFHSQASSGVASRGLNNGTYEYSRRVFGSVMNDVSRRAD
RQPVPYPSY
NT seq 570 nt   +upstreamnt  +downstreamnt
atggcgaggaatccgggctgcgccgtctacataggtaacttggatgaaaaggtctcggag
agggttttgtatgagattcttattcaggtaggtcgtgtagtagacttgcacataccccgt
gacaaggaaactagtcgacccaaaggttttgcttttgctgagtatgaaacagaggagatt
gcccagtatgctgttaggctgttttctggccttgttcggcttcacaatagaacacttaaa
tttgcgatttctgggcaagacaaggcctcttcaaatgtcaatgttcctgtaacacctaaa
atgaaccctataccactatcaaatccacctcaatcaatgagatttggtgatactcctgtg
tcacaacatagagtgataaacggtaggattgcaggccatggtgtttctccaaatcattct
tatgatttccattcccaagcatcaagtggggtagcaagtagaggattaaacaatggtaca
tatgagtatagtagacgtgtatttggttctgttatgaatgatgttagccgtcgagctgac
agacaaccagttccatacccgtcctactag

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