Triticum dicoccoides (wild emmer wheat): 119346734
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Entry
119346734 CDS
T07278
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119346734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119346734
03009 Ribosome biogenesis [BR:
tdc03009
]
119346734
04131 Membrane trafficking [BR:
tdc04131
]
119346734
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119346734
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119346734
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119346734
Membrane trafficking [BR:
tdc04131
]
SNARE
SNARE associated proteins
Others
119346734
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119346734
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119346734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
AAA_33
AAA_5
CDC48_2
AAA_14
AAA_22
TIP49
NPHP3_N
nSTAND3
RNA_helicase
AAA_17
Mg_chelatase
AAA_28
Parvo_NS1
AAA_18
ABC_tran
ATPase_2
IstB_IS21
AAA_7
NACHT
NB-ARC
ResIII
Viral_helicase1
AAA_24
TsaE
Zeta_toxin
DUF815
Sigma54_activ_2
Vps4_C
Rad17
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
119346734
NCBI-ProteinID:
XP_037471813
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MASTAASKKAANRLVVEEAATNDDNSVCNLHPATMEKLSIFQGDIVLLKGKRRHNTVCMA
LPDDTCEGHKVRINKVARSNLRVRIADVVSVHLCHDAKFGKRVHILPLDDTVEGITGNLF
DAYLKPYFVDAFRPVHKGDLFLVRGGMRSVEFKVMEIDPAADYCVVAPDTEIFCEGEPVK
REDEERLDDVGYDDVGGMGKPLTLIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
NREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFERFDREIDIGV
PDEVGRLEVLRIHTKNMKLDEDVNLEVVAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDTIDAEILNSMAVTNDHLKTALVGTNPSALRETIVEVPNVTWNDIGGLDGVKRELQE
TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW
FGESEANVREIFNKARQSAPCVLFFDELDSIATQRGGRVGDAGGAADRVLNQLLTEMDGM
NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASRHQIFKACLRKSPVAKDVD
LGALARFTAGFSGADITEICQRACKYAIREDIEKDMERQRMGKDTMEVDGGQEDEVAQIK
ASHFEESMRYARRSMSDADIRKYQAFAQTLQQSRGFGTEFRFPAQPQAAEAAVHTSAAAA
ADEDEDDLYK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacggcggcgtcgaagaaggcggcgaaccggctggtggtggaggaggccgcc
accaacgacgacaactccgtgtgcaacctccacccggccacaatggagaagctctccata
ttccagggcgacatcgtgctgctcaagggcaaacgccgccacaatacggtctgcatggca
ctgcccgacgacacctgcgaggggcacaaggtcaggatcaacaaggtggcccgctccaac
ctgcgcgtgcgcatcgccgacgtcgtgtccgtgcacctgtgccacgacgccaagttcggc
aagcgcgtgcacatcctccctctggacgacaccgtcgagggcatcacgggcaacctcttc
gacgcctacctcaagccctacttcgtggacgccttccgcccggtccacaagggcgacctc
ttcctcgtgcgcggcggcatgcggagcgtcgagttcaaggtcatggagatcgaccccgcg
gcggactactgcgtcgtggcgcccgacacggagatattctgcgagggcgagcccgtcaag
cgggaggacgaggagaggctggacgatgtcggctacgacgacgtgggtggcatggggaaa
ccgttgactctgatcagggagctcgtcgagttgccactcaggcatccgcagcttttcaag
tccattggcgtcaagcctcccaagggcatcctcctctacggccctcccgggtcgggcaag
actctgatcgcccgtgcggtggctaacgagactggggccttcttcttcctcatcaacggc
ccggagataatgtccaagatggccggagagagcgagagcaacctgaggaaggccttcgag
gaggccgagaagaacgcgccctccatcatcttcatcgacgagatcgactccatcgctcct
aacagggagaagactcacggcgaggttgagaggcgcatcgtctcccagctgctgactctg
atggacggcatgaaagcccgcgcgcacgtcattgtcatgggcgccacaaaccgtcccaac
agcatcgaccccgccttgaggcgcttcgagaggttcgatcgtgagatcgacattggcgtg
ccggacgaggtcgggcgtctcgaagtgctccgcatccataccaagaacatgaagctggac
gaggacgtcaaccttgaggtggttgccaaggatacgcacggctacgtcggcgccgacttg
gccgcgctctgcactgaggcggcgctgcagtgcatcagggagaagatggacgtgatcgac
ttagaggacgataccattgatgccgagatcttgaactccatggccgtcaccaatgaccac
cttaagacggctctcgtcggcaccaacccgtctgcactacgtgagaccattgtcgaggtg
cccaacgtcacctggaatgatatcggcggcctcgacggcgtcaagagggagctgcaagag
accgttcagtacccggtggagcacccggagaaattcgagaagttcggcatgtcaccgtcc
aagggcgtcctcttctacgggccaccgggatgtggcaagaccttgttggcgaaggcgatc
gccaacgagtgccaggccaacttcatcagcatcaaggggccagagttgctcaccatgtgg
ttcggcgagagcgaggccaacgtgcgcgagatcttcaacaaggcgcgtcagtctgcgccg
tgcgtgctcttcttcgacgagctggactccatcgctactcaaaggggcggcagagtgggc
gacgccggtggcgcggcggacagggtcctgaaccagctgctcactgagatggacggcatg
aacgccaagaagactgtcttcatcatcggcgctaccaataggccggacataattgactcg
gcgttgctccgtcccggccgcctggaccagcttatctacatccccttgccggacgaggcc
tcgcgacaccagatcttcaaggcctgcctccggaagtctcccgtggccaaggacgtcgac
ctcggtgcactcgctaggttcaccgccggcttcagcggcgccgatatcacagagatctgc
cagagggcgtgcaagtacgccatcagagaagacattgaaaaggacatggagaggcagagg
atggggaaagacaccatggaggtggacggcggtcaggaagacgaggtggctcagattaag
gcgtctcacttcgaggagtcgatgaggtacgcgaggcggagcatgagcgatgctgacatc
aggaagtaccaggcgttcgcgcagacgctgcaacagtctagggggttcggcaccgagttc
cgcttcccagcgcagccacaggcggcagaagctgctgtccacacctccgcggcagctgct
gctgatgaggatgaagacgatctttacaagtga
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