KEGG   Triticum dicoccoides (wild emmer wheat): 119346734
Entry
119346734         CDS       T07278                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119346734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119346734
   03009 Ribosome biogenesis [BR:tdc03009]
    119346734
   04131 Membrane trafficking [BR:tdc04131]
    119346734
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tdc04147]
    119346734
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     119346734
Ribosome biogenesis [BR:tdc03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    119346734
Membrane trafficking [BR:tdc04131]
 SNARE
  SNARE associated proteins
   Others
    119346734
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    119346734
Exosome [BR:tdc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119346734
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_2 AAA_16 AAA_33 AAA_5 CDC48_2 AAA_14 AAA_22 TIP49 NPHP3_N nSTAND3 RNA_helicase AAA_17 Mg_chelatase AAA_28 Parvo_NS1 AAA_18 ABC_tran ATPase_2 IstB_IS21 AAA_7 NACHT NB-ARC ResIII Viral_helicase1 AAA_24 TsaE Zeta_toxin DUF815 Sigma54_activ_2 Vps4_C Rad17 Zot Molydop_binding
Other DBs
NCBI-GeneID: 119346734
NCBI-ProteinID: XP_037471813
LinkDB
Position
Unknown
AA seq 790 aa
MASTAASKKAANRLVVEEAATNDDNSVCNLHPATMEKLSIFQGDIVLLKGKRRHNTVCMA
LPDDTCEGHKVRINKVARSNLRVRIADVVSVHLCHDAKFGKRVHILPLDDTVEGITGNLF
DAYLKPYFVDAFRPVHKGDLFLVRGGMRSVEFKVMEIDPAADYCVVAPDTEIFCEGEPVK
REDEERLDDVGYDDVGGMGKPLTLIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
NREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFERFDREIDIGV
PDEVGRLEVLRIHTKNMKLDEDVNLEVVAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDTIDAEILNSMAVTNDHLKTALVGTNPSALRETIVEVPNVTWNDIGGLDGVKRELQE
TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW
FGESEANVREIFNKARQSAPCVLFFDELDSIATQRGGRVGDAGGAADRVLNQLLTEMDGM
NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASRHQIFKACLRKSPVAKDVD
LGALARFTAGFSGADITEICQRACKYAIREDIEKDMERQRMGKDTMEVDGGQEDEVAQIK
ASHFEESMRYARRSMSDADIRKYQAFAQTLQQSRGFGTEFRFPAQPQAAEAAVHTSAAAA
ADEDEDDLYK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggcgagcacggcggcgtcgaagaaggcggcgaaccggctggtggtggaggaggccgcc
accaacgacgacaactccgtgtgcaacctccacccggccacaatggagaagctctccata
ttccagggcgacatcgtgctgctcaagggcaaacgccgccacaatacggtctgcatggca
ctgcccgacgacacctgcgaggggcacaaggtcaggatcaacaaggtggcccgctccaac
ctgcgcgtgcgcatcgccgacgtcgtgtccgtgcacctgtgccacgacgccaagttcggc
aagcgcgtgcacatcctccctctggacgacaccgtcgagggcatcacgggcaacctcttc
gacgcctacctcaagccctacttcgtggacgccttccgcccggtccacaagggcgacctc
ttcctcgtgcgcggcggcatgcggagcgtcgagttcaaggtcatggagatcgaccccgcg
gcggactactgcgtcgtggcgcccgacacggagatattctgcgagggcgagcccgtcaag
cgggaggacgaggagaggctggacgatgtcggctacgacgacgtgggtggcatggggaaa
ccgttgactctgatcagggagctcgtcgagttgccactcaggcatccgcagcttttcaag
tccattggcgtcaagcctcccaagggcatcctcctctacggccctcccgggtcgggcaag
actctgatcgcccgtgcggtggctaacgagactggggccttcttcttcctcatcaacggc
ccggagataatgtccaagatggccggagagagcgagagcaacctgaggaaggccttcgag
gaggccgagaagaacgcgccctccatcatcttcatcgacgagatcgactccatcgctcct
aacagggagaagactcacggcgaggttgagaggcgcatcgtctcccagctgctgactctg
atggacggcatgaaagcccgcgcgcacgtcattgtcatgggcgccacaaaccgtcccaac
agcatcgaccccgccttgaggcgcttcgagaggttcgatcgtgagatcgacattggcgtg
ccggacgaggtcgggcgtctcgaagtgctccgcatccataccaagaacatgaagctggac
gaggacgtcaaccttgaggtggttgccaaggatacgcacggctacgtcggcgccgacttg
gccgcgctctgcactgaggcggcgctgcagtgcatcagggagaagatggacgtgatcgac
ttagaggacgataccattgatgccgagatcttgaactccatggccgtcaccaatgaccac
cttaagacggctctcgtcggcaccaacccgtctgcactacgtgagaccattgtcgaggtg
cccaacgtcacctggaatgatatcggcggcctcgacggcgtcaagagggagctgcaagag
accgttcagtacccggtggagcacccggagaaattcgagaagttcggcatgtcaccgtcc
aagggcgtcctcttctacgggccaccgggatgtggcaagaccttgttggcgaaggcgatc
gccaacgagtgccaggccaacttcatcagcatcaaggggccagagttgctcaccatgtgg
ttcggcgagagcgaggccaacgtgcgcgagatcttcaacaaggcgcgtcagtctgcgccg
tgcgtgctcttcttcgacgagctggactccatcgctactcaaaggggcggcagagtgggc
gacgccggtggcgcggcggacagggtcctgaaccagctgctcactgagatggacggcatg
aacgccaagaagactgtcttcatcatcggcgctaccaataggccggacataattgactcg
gcgttgctccgtcccggccgcctggaccagcttatctacatccccttgccggacgaggcc
tcgcgacaccagatcttcaaggcctgcctccggaagtctcccgtggccaaggacgtcgac
ctcggtgcactcgctaggttcaccgccggcttcagcggcgccgatatcacagagatctgc
cagagggcgtgcaagtacgccatcagagaagacattgaaaaggacatggagaggcagagg
atggggaaagacaccatggaggtggacggcggtcaggaagacgaggtggctcagattaag
gcgtctcacttcgaggagtcgatgaggtacgcgaggcggagcatgagcgatgctgacatc
aggaagtaccaggcgttcgcgcagacgctgcaacagtctagggggttcggcaccgagttc
cgcttcccagcgcagccacaggcggcagaagctgctgtccacacctccgcggcagctgct
gctgatgaggatgaagacgatctttacaagtga

DBGET integrated database retrieval system