KEGG   Triticum dicoccoides (wild emmer wheat): 119346744
Entry
119346744         CDS       T07278                                 
Name
(RefSeq) cell division control protein 48 homolog D-like
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119346744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119346744
   03009 Ribosome biogenesis [BR:tdc03009]
    119346744
   04131 Membrane trafficking [BR:tdc04131]
    119346744
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tdc04147]
    119346744
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     119346744
Ribosome biogenesis [BR:tdc03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    119346744
Membrane trafficking [BR:tdc04131]
 SNARE
  SNARE associated proteins
   Others
    119346744
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    119346744
Exosome [BR:tdc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119346744
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_2 AAA_16 AAA_33 AAA_5 CDC48_2 AAA_14 AAA_22 TIP49 NPHP3_N RNA_helicase AAA_17 nSTAND3 Mg_chelatase AAA_28 Parvo_NS1 AAA_18 ABC_tran ATPase_2 IstB_IS21 AAA_7 NACHT NB-ARC Vps4_C ResIII Viral_helicase1 AAA_24 TsaE Zeta_toxin DUF815 Sigma54_activ_2 Rad17 Zot Molydop_binding
Other DBs
NCBI-GeneID: 119346744
NCBI-ProteinID: XP_037471820
LinkDB
Position
Unknown
AA seq 790 aa
MASTAASKKAANRLVVEEAATNDDNSVCNLHPATMEKLSIFQGDIVLLKGKRRHNTVCMA
LPDDTCEGHKVRINKVARSNLCVRIADVVSVHLCHDAKFGKRVHILPLDDTVEGITGNLF
DAYLKPYFVDAFRPVHKGDLFLVRGSMRSVEFKVMEIDPAADYCVVAPDTEIFCEGEPVK
REDEERLDDVGYDDVGGMGKPLTLIREVVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
NREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV
PDEVGRLEVLRIHTKNMKLDEDVNLEVVAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDTIDAEILNSMAVTNDHLKTALVGTNPSALRETIVEVPNVTWNDIGGLDGVKRELQE
TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW
FGESEANVREIFNKARQSAPCVLFFDELDSIATQRGGRVGDAGGAADRVLNQLLTEMDGM
NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASRHQIFKACLRKSPVAKDVD
LGALARFTAGFSGADITEICQRACKYAIREDIEKDMERQRMGKDTMEVDGGQEDEVAQIK
ASHFEESMRYARRSVSDADIRKYQAFAQTLEQSRGFGTEFRFPAQPQAAEAAVHTSATAA
ADEDEDDLYK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atggcgagcacggcggcgtcgaagaaggcggcgaaccggctggtggtggaggaggccgcc
accaacgacgacaactccgtgtgcaacctccacccggccacaatggagaagctctccata
ttccagggcgacatcgtgctgctcaagggcaaacgccgccacaatacggtctgcatggca
ctgcccgacgacacctgcgaggggcacaaggtcaggatcaacaaggtggcccgctccaac
ctgtgcgtgcgcatcgccgacgtcgtgtccgtgcacctgtgccacgacgccaagttcggc
aagcgcgtgcacatcctccctctggacgacaccgtcgagggcatcacgggcaacctcttc
gacgcctacctcaagccctacttcgtggacgccttccgcccggtccacaagggcgacctc
ttcctcgtgcgcggcagcatgcggagcgtcgagttcaaggtcatggagatcgaccccgcg
gcggactactgcgtcgtggcgcccgacacggagatattctgcgagggcgagcccgtcaag
cgggaggacgaggagaggctggacgatgtcggctacgacgacgtgggtggcatggggaaa
ccgttgactctgatcagggaggtcgtcgagttgccacttaggcatccgcagcttttcaag
tccattggcgtcaagcctcccaagggcatcctcctctacggccctcccgggtcgggcaag
actctgatcgcccgtgcggtggctaacgagaccggggccttcttcttcctcatcaacggc
ccggagataatgtccaagatggccggagagagcgagagcaacctgaggaaggccttcgag
gaggccgagaagaacgcgccctccatcatcttcatcgacgagatcgactccatcgctcct
aacagggagaagactcacggcgaggttgagaggcgcatcgtctcccagctgctgactctg
atggacggcatgaaagcccgcgcgcacgtcattgtcatgggcgccacaaaccgtcccaac
agcatcgaccccgccttgaggcgcttcgggaggttcgatcgtgagatcgacattggcgtg
ccggacgaggtcgggcgtctcgaagtgctccgcatccataccaagaacatgaagctggac
gaggacgtcaaccttgaggtggttgccaaggatacgcacggctacgtcggcgccgacttg
gccgcgctctgcactgaggcggcgctgcagtgcatcagggagaagatggacgtgatcgac
ttagaggacgataccattgatgccgagatcttgaactccatggccgtcaccaatgaccac
cttaagacggctctcgtcggcaccaacccgtctgcactacgtgagaccattgtcgaggtg
cccaacgtcacctggaatgatatcggcggcctcgacggcgtcaagagggagctgcaagag
accgttcagtacccggtggagcacccggagaaattcgagaagttcggcatgtcaccgtcc
aagggcgtcctcttctacgggccaccgggatgtggcaagaccttgttggcgaaggcgatc
gccaacgagtgccaggccaacttcatcagcatcaaggggccagagttgctcaccatgtgg
ttcggcgagagcgaggccaacgtgcgcgagatcttcaacaaggcgcgtcagtctgcgccg
tgcgtgctcttcttcgacgagctggactccatcgctacccaaaggggcggcagagtgggc
gacgccggtggcgcggcggacagggtcctgaaccagctgctcactgagatggacggcatg
aacgccaagaagactgtcttcatcatcggcgctaccaataggccggacataattgactcg
gcgttgctccgtcccggccgcctggaccagcttatctacatccccttgccggacgaggcc
tcgcggcaccagatcttcaaggcctgcctccggaagtctcccgtggccaaggacgtcgac
ctcggtgcactcgctaggttcaccgccggcttcagcggcgccgatatcacagagatctgc
cagagggcgtgcaagtacgccatcagagaagacattgaaaaggacatggagaggcagagg
atggggaaagacaccatggaggtggacggcggtcaggaagacgaggtggctcagattaag
gcgtctcacttcgaggagtcgatgaggtacgcgaggcggagcgtgagcgatgctgacatc
aggaagtaccaggcgttcgcgcagacgctggaacagtctagggggtttggcaccgagttc
cgcttcccagcgcagccacaggcggcagaagctgctgtccacacctccgcgacagctgct
gctgatgaggatgaagacgatctttacaagtga

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