Triticum dicoccoides (wild emmer wheat): 119347897
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Entry
119347897 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119347897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119347897
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119347897
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
HECT type E3
119347897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
Adaptin_N
Htt_N-HEAT_1
HEAT
HEAT_2
RGM_N
Motif
Other DBs
NCBI-GeneID:
119347897
NCBI-ProteinID:
XP_037472291
LinkDB
All DBs
Position
1B:complement(537788088..537796347)
Genome browser
AA seq
1523 aa
AA seq
DB search
MDRCRKRPDSDPGGSGEAEPPADKRPCTAEPSTSAAAAVAAAPAQPEQAASDMDTSSSGH
AAEADADADADVDGDDGDGDGDGDGGSSCESDGDGGPGSGKFRRMVAAVASEGAGGGALL
ASLTELCEALSFCTEDAGGYFPVESAARALVRLAGAEVASPDEMLLAVRAITYLCDAMPR
AADAVVRHGLLPVLCSRLLAIEYLDVAEQCLQAFEKISLRQPAQCLQAGMITAVLAYIDF
FSASIQRVAVSAVANACKKVPADCSQFVMDSIPMLCNLLQSEDKMVVEKVATCLISIVDS
FSGSVELLDQLCHQGLVEKVLPLINASGLTSLNPSTCSNLIGLLAKLACTSLVAVKSLFE
LNVGSTIRGILVSSDLSHGMPYLPLENQNNQVNEALKLAIQLIPSAARDVEDTYMVLAKE
KIIVDEPGFLCQFSTDILPILIKAVNSGANSYICYGCSSIVNNICYFSKPEMLQELLKET
NISSFLAGLLSRKDHHVLISSLKIIEILMQKLPDAYLGSFIKEGVVNAVEALLMQEDCSK
SSPPLSDDTQQSENQPVIRNKPTCFCYAFDSRQSESAETRACRIGQGNLFNFARHVKTTY
FTAEAVNSEMGLTEILQKLKTCCAVLNDSADKSLNQDSLQNEEHLSTILSEVMMELHGGE
TMTTFEFLESGLVKSLLNYLSNGKYLQVDDNLKDYNAEHFCAVLKRFQSFARICFSRMEQ
GWGDMLLTLLVRKLQNALTSLDNFPVIMSHNFKSRSNISDIPIRHSTISPCIRVRFKKDE
DETNLSSYDNSVNLEISSSLHSIEQFLWPKVSTCTSDQNTESPPSSVAFESKCAEDDPQE
RDSSPESSPSSEGIIRENQSSSVEPCSKKGSPSSAGGQPERNKSTGTDCAVQPKLVFSLK
GKELDRSVTLYQSILQDQINAGADVILDTQFWRSVHDITFRTAANPEKDDSPENLSNAAI
STDDSKTGLMWQALPFFSSLLLGKIPCKLDRSNSLYDILFMLKVLEGLNRYSFHLVSNER
NHAFAQGKLTDLDDLKPSVSSVPLQEFVSAKLTDKLEQQLHDPLVLRSRCLPLWCTELMS
ACPFLFSFEARWKYFQLTAFGSSSMQRGHMIDTSGSNISTERGSPISRKKFKVDRDDILA
SAAKMMRSYAKSNALLEVEYEEEVGTGLGPTMEFYTLISHEFQKSGLGMWRGELPCEAGT
DNTHIGPRTVVAPNGLFPRPWSASVDCASFLEVNKRFHLLGQVLAKAIKDGRILDIPFSK
AFYKLILGQELNIYDINSFDPELAMTLMEFKALTCQRKYLESCSTRECQSTSDLSYRGCK
IEDLVIDFAVPGYPEYVLSLERTSDNVTGENLEEYVSFVVEATVKSGITRQLEAFESGFS
QVFPLSTLRAFSEDELERLLCGEQDNWDFVKLVDHIKFDHGYTSSSPAVLNLLEIIQEFG
CHERRAFLQFITGSPRLPPGGLAALNPNLTVVRKHSNNDADDDLPSVMTCANYLKLPAYC
SKERMREKLLYAITEGQGSFHLS
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctgccggaagcgccccgactccgaccccgggggctccggcgaggccgagccc
cccgccgataagcgcccctgcaccgccgagccctccacctccgccgccgccgccgtcgcc
gccgcgcccgcgcagccggagcaggccgcctccgacatggacacctcgtcctccggccac
gccgccgaagccgatgccgatgctgatgccgatgtggacggcgacgatggggacggggac
ggggacggggacggcgggtcgtcgtgcgagtcggatggggacggggggcccgggagcggc
aagttccgccggatggtggcggccgtcgcctcggagggcgccgggggaggcgcgctgctc
gcgtcgctcacggagctctgcgaggcgctctccttctgcaccgaggacgccgggggctac
ttccccgtcgagtcggccgcgcgggcgctcgtgcggctggccggcgccgaggtcgccagc
cccgacgagatgctgctcgcggtgcgcgccatcacctacctctgcgacgccatgccgcgc
gccgccgacgccgtcgtccgccacggcctgctccccgtgctctgctcccggctcctcgcg
atcgagtaccttgatgtggccgagcagtgcttgcaggcgtttgagaagatatcgctgcgg
cagccggcgcagtgcttgcaggcaggcatgataactgccgtgctcgcatacattgacttc
ttctctgcaagtatccagagggtcgctgtctcagctgttgcaaatgcctgcaagaaggtc
cccgcagattgctcccagtttgtgatggattcgatcccaatgctgtgtaatctactgcag
tccgaggacaagatggttgttgaaaaggttgcaacttgcctgataagcattgtagactct
tttagtggttcagtggagcttcttgaccagctctgccaccagggcctggtagagaaggtc
cttcctttgatcaacgccagcggactcacttcccttaacccatcaacttgcagtaacttg
atcgggcttcttgctaagctagcctgtacttcacttgtggcagtgaagtctctctttgag
ttgaatgttggtagcaccataagggggattttggtcagttcagatctctcccatgggatg
ccatacctgcctttggaaaaccaaaataaccaggttaatgaagctctaaaattagcaatc
cagcttattccttctgcggcaagagatgttgaagacacctatatggtacttgctaaagaa
aaaataattgtcgatgaaccagggttcttgtgtcagttctctacggatatccttcctatc
ttgatcaaggcagtcaactctggtgcaaattcgtacatttgctatggctgttcttcaatt
gtaaataacatctgttacttcagtaaacctgaaatgcttcaagagttgctcaaggaaaca
aacatatcaagcttcttggctggtttattgtcccggaaggatcatcatgtgctaatctca
tcactgaagattattgagattctcatgcaaaagcttccggatgcttaccttggatctttt
atcaaagaaggtgttgtcaatgcagtagaggctcttcttatgcaagaagattgctcaaag
tccagcccccctctctctgatgacactcaacagtcagaaaatcaacctgttataagaaat
aaacctacatgtttctgctatgcatttgattcccgccaatctgagtctgctgaaacaagg
gcttgtaggattgggcaggggaacctttttaatttcgcaagacatgtgaagacaacttac
tttacagctgaagcagtgaattcagagatggggttaacggagattttgcagaagctcaaa
acttgctgtgcagttctaaatgactctgctgacaagtcattaaaccaagacagtcttcaa
aatgaagaacacttgtctaccattttgagtgaggtgatgatggagcttcacggaggagaa
acaatgacgacgtttgaattccttgagagtggactggtgaaatctttgttaaattacctg
tctaacggcaaataccttcaggtggatgacaatcttaaagattataatgctgaacatttt
tgtgctgtgctgaaaagatttcagtcatttgcccggatttgtttttcaagaatggagcaa
ggttggggtgatatgctcttgacactacttgtaaggaaactgcagaatgctcttacttct
cttgacaacttcccagtgataatgagccacaatttcaagtcaaggagcaatatttctgat
atccctattcgccactcaacaattagtccatgtatccgagtacgtttcaagaaggatgaa
gatgaaacaaacttatcaagctatgataattctgtgaatttggaaatctcttcttccttg
cattctattgaacaatttctgtggcccaaagtcagtacatgcacaagtgatcagaatact
gaatcaccacctagtagtgttgctttcgagagcaaatgtgctgaagatgaccctcaggaa
agagattccagcccagaatcttccccttcatcagagggtatcatcagggaaaatcaaagt
tcttctgtagaaccatgctcgaagaaagggtcgccatcttccgctggaggtcaaccagaa
cgaaacaagtcgaccgggactgattgtgctgtacagccaaaactggtatttagcctgaaa
ggaaaagagcttgacagatctgttactctatatcaatcaatcctgcaagatcagatcaat
gcgggagctgatgtaattttggacacccagttttggcgcagtgtgcatgacataacattt
cgaacagctgcaaatccagaaaaagatgattctcctgagaacctgtctaatgcagcgata
tcaacagatgacagtaaaactggtttaatgtggcaagcactccctttcttcagcagcttg
ttgcttggcaagatcccttgcaaacttgatagatcaaattcattgtatgacatattgttt
atgctgaaagttttagaaggattaaaccggtactcgtttcacctcgtgtctaatgagaga
aaccatgcttttgctcaagggaagttaactgaccttgatgatctgaagccttctgtttct
tcagttccactgcaggagtttgttagtgctaaattgacagataaactggagcaacagttg
catgatcccttggttttaaggtctcgctgtctgcctttatggtgcactgaactgatgtct
gcgtgccctttcttattttcctttgaggcaagatggaagtatttccaactgacagcattt
ggttcttcatcaatgcaacgtggccatatgatagatacaagtggtagcaatatatcaaca
gaaagaggttcacccatttcacggaaaaagttcaaagttgatcgtgatgatatactggct
tcagctgcgaaaatgatgcgttcctatgctaagagtaacgcactgcttgaagtagaatat
gaagaagaagtaggcacaggtttaggtcctacgatggagttctatacgttgataagtcat
gagtttcagaagtctggtttaggcatgtggaggggtgagcttccttgtgaagctggcact
gacaatactcacattggtccccggactgtggtcgcgcctaatggactgtttcctcgacca
tggtctgcttctgtagattgtgcttccttcttggaagtaaataaaaggtttcacctcctt
ggtcaggttcttgcaaaggcaattaaggatggcagaattctcgacattccgttttccaaa
gcattttacaagcttatcctaggacaggagcttaatatatatgatatcaattcatttgat
cctgaactggcaatgacccttatggagtttaaagcgcttacttgtcaaaggaaatattta
gaatcatgttcgacaagggaatgccagagcacatctgatttgtcttatcgaggttgtaaa
attgaggatcttgttattgactttgctgtcccagggtatccagaatatgtgctttcttta
gagcgtacttcagataatgtaactggtgagaatttggaagaatatgtttcctttgttgtc
gaggcaacggttaaaagtggaatcacaagacagctggaggcttttgagtcaggattcagt
caggtatttccactaagcacacttcgagcattctcagaggatgagctggagagattactc
tgcggagaacaagataattgggattttgtgaaacttgtggatcacataaaatttgatcat
ggctacacctccagcagtcctgcagtccttaatttgttagagatcatacaagagtttgga
tgccatgaacgcagagctttcttgcaatttataacgggttcacctcggctccctccaggc
ggtttagctgcactgaatccaaatttgacagttgtcaggaagcatagcaacaatgatgct
gatgatgatctgccaagtgtgatgacttgcgctaactatcttaagttacctgcctactgc
tctaaggaaaggatgagggagaagctactctacgcgattacagaggggcaggggtccttc
cacctgtcctga
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integrated database retrieval system
