Triticum dicoccoides (wild emmer wheat): 119348804
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Entry
119348804 CDS
T07278
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119348804
03036 Chromosome and associated proteins [BR:
tdc03036
]
119348804
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119348804
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119348804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
HHH_9
SH2
Tex_central_region
Tex_N
HHH_3
Motif
Other DBs
NCBI-GeneID:
119348804
NCBI-ProteinID:
XP_037472689
LinkDB
All DBs
Position
1B:566826631..566836064
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AA seq
1619 aa
AA seq
DB search
MGRTVVSDEEEDDFIEAEEEDEPRPSRRARDDDDEQDDDEEEEDDEDEGQNEYEKDGFIV
DDADEDEEEEEEEARASDDERRKKKKKRKKKRETEDFELDEDDYMLLQDNNITGITRPKP
PENKFKRLKKAGRESEMDGRSGFSDHDGAGKGRTAEETVRSSLFGNEEPFEEDFVEEDQQ
VDEDEVGEDDMDDEMGDFIVDEEEIDVNGQVVKRKKVKRKPLRQAAGVSSSALQEAHDIF
GDVDELLALRKQELERDAINSGELRGNRLEDEFEPFILAEKYMTPKDEQIKETDIPERIQ
LSEELTGNPIDGDANREEESVWIHNQLIGDAFLSLFGNGQLNKEIDQSDIVNVLNMLHTH
KFEVPFIAMYRKESCMSLIKDNDANEQANEEDTRKMKWHKLLWAVQTLDRKWLLLQKRKV
ALQIYYERRYDDEKRRIDDVTRQALNRQLYHSIIDALKEAKSEKEVEDVDAKFNLHFPPG
EVEEVGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGQHLTLTRIPEAGELDSGKDS
PEDVAANFTCAMFETSQDVLRGARHMAAVEIGCEPIVKKHIRGIFMDKAVVSTKPTPEGS
SVIDAYHQLSGVEWLQEKPLSKFGDAQWLLIQKAEEEKLLKVTITLPEDAKKALMSEARE
NYLSDCVSKSAQLWDEQRKMILDDAFLNFLLPAMEKEARSLLTAKAKCFLSMEYGKQFWD
KVSLAPWKKKDADKKDADIDLDDESELRVMACCWGPGKPATTFVMLDSSGELVDVLYAGS
ISLRSQGVAEQQRKRNDQQRVLKFMTDHSPHVVCVGASNLNCRQLKDDIYEVIFKMVEDH
PRDVNPQMENFSIVYGDESVPRLYENSRISSDQLPAQSAIVKRAVALGRYLQNPLAMVAT
LCGPGKEILSWKLHPLEQFLTPDEKYEVVEQVMVDATNQIGFDVNLAASHEWHFSTLQFV
AGLGPRKASALQKELVREGSIFSRKELVKPLGRKVFMNASGFLRVRRSGAAAASAQIIDL
LEDTRIHPESYALAKNLAKDVCAGDGVEANEMDDDEQEMAIEHVREKQDQLDRLDIDEYS
RSIGDDKRETLIDIKLELLCGFKDRRTPYAEPSPDEEFWLLSGETEDNISDGRIVQVTVR
HIQDNRIICTFDSGLKAIVMGDNYSDDGFDLESLQLHEGDVLTGKIKNVNKNRFIVYLTC
KQSEINRWPFSRSNHDPYYRPQKVVLAQDDKARKQKEAKKHFKPRMIVHPHFQNLTAEEA
MQFLGDKEPGEKVIRPSSRGPSFLTLTLKIFDGVFAHKEITESGKDHKDITSLLRLGKTL
TIGDETFEDLDEVIDRYVDPLVGHLKSMLSYRKFRKGLKGEVDDMLRAEKSENPMRIVYC
FGISHEHPGTFILSYIRSTNPHHEYVGLYPKGFRFRKKDFDSIDRLVSYFQKHIDKPPPD
AGPSMRNVAAMVPMKNSAWGSGGANDGRRGDGDNDRDRPFSGRSGGRFDSRNSSGGRGRG
RGRGRGNFGSDGDGGGGGGWTDNIGSGGGAWGTGGDGGDSNRGGGGDGGWGAPAAAAATD
GGTGGWGTPAAAAATDGGAGGWAAATTGAAGDDSGWGSAKKAVPAQDSGGGWGSGGGGW
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcacggtggtttccgacgaggaagaggacgacttcatcgaggccgaggaagag
gacgagccgcggccgtcgcggagggccagggatgacgacgacgagcaggacgacgatgag
gaggaggaggatgatgaagatgagggacagaatgagtacgagaaggatggcttcatagtg
gatgatgcggatgaagacgaggaagaggaggaggaggaggcgagagctagtgatgatgaa
agacgcaagaagaaaaagaaaagaaagaagaagagagagacggaggatttcgagcttgat
gaggatgactacatgttgctccaggataataacattactggcatcactcgtccaaagcct
cctgaaaataagtttaagcggttgaagaaggcaggacgggaatctgaaatggatgggcgc
tctggcttctccgatcatgacggagcaggaaaaggccggactgctgaggagacagttcgt
agctccttgtttggtaatgaagaaccgtttgaggaggattttgttgaggaggatcagcag
gtagatgaagatgaggttggtgaagatgatatggatgatgaaatgggcgatttcattgtg
gacgaagaggaaatcgatgtgaatggccaagttgtgaaaaggaagaaggttaaaagaaag
cctctgcgacaagctgcaggtgtatcatcatctgcgctacaagaggcccatgatatattt
ggggatgttgatgagctattagcactaagaaaacaagagcttgagagggatgctattaat
tccggcgagttgagaggaaacaggcttgaagatgagtttgaaccatttattctcgcagaa
aagtatatgacaccaaaggatgagcagataaaagaaactgatatacctgagaggatccag
ctgtctgaagagttaactggcaatcctatagatggcgatgcaaatagagaggaagaaagt
gtatggatacacaaccaactaatcggggatgcatttctgtccctttttggcaatgggcaa
ttgaacaaggagattgatcagagtgacatcgtgaatgtcttgaacatgctacatacccac
aaatttgaagttccattcattgcaatgtataggaaggaaagttgcatgagtctgataaaa
gataacgatgccaatgaacaagcaaatgaagaagatacgcgtaaaatgaagtggcataag
ctgctttgggctgttcagaccttagacagaaagtggcttcttcttcagaagcgcaaggtt
gctttgcagatttattatgagagaagatatgatgacgagaaacgaagaatagacgatgtt
acaaggcaggcacttaatcgacaactctaccactctatcattgatgcactgaaggaagca
aaatcagagaaagaagtggaggatgttgacgcgaaattcaatttacatttccctcctggt
gaagttgaagaagtaggtcaatttaagcgaccaaaaaggaaatccttgtacagtatttgt
cacaaggcagggttgtgggaggttgctaaccaatttggtcggagtgctgagcaattaggc
caacatctaactttaacgaggatacctgaagcgggcgagcttgacagtgggaaagattct
cctgaagatgttgctgcaaatttcacatgcgcaatgtttgaaacgtcacaagatgtcctt
cggggtgccagacacatggcagcagttgagatcggttgtgagcctattgtaaaaaagcat
atcaggggtatcttcatggataaagcagttgtatcaacaaagcccacacctgagggcagt
tcggtcatagatgcttaccaccaattatcaggtgtggagtggctgcaagagaaaccacta
agcaagtttggagatgcacagtggcttcttattcagaaagcagaggaagaaaagcttctc
aaggttaccataacattgccagaggatgcaaagaaagcgctcatgtctgaggctcgtgag
aattacttaagtgactgtgtcagcaagtctgcacaactgtgggatgagcaacggaagatg
atactggatgatgccttcttgaattttctacttccagcaatggaaaaggaagctcgatca
ctgttgacagcaaaagccaaatgttttttgtctatggaatatgggaaacagttctgggac
aaagtttctcttgctccttggaagaagaaggatgcggacaagaaggatgcggacattgat
ctggatgatgagtcagagttacgagtaatggcctgctgctggggtcctgggaagccagca
accacatttgtaatgctagactcatcaggagaattggttgatgttctgtatgctggttct
attagtcttagatctcaaggtgttgctgaacagcagcgtaagagaaatgaccagcagagg
gttctgaagttcatgactgaccattcgccacatgttgtgtgtgtaggagcttcgaatttg
aactgcagacaactcaaggatgatatttatgaggttattttcaaaatggtggaagaccac
ccaagagatgtgaacccacaaatggaaaatttcagcattgtctatggtgatgaatctgtg
cctcgcttgtacgagaactctcgaatatcttcagatcagctgcctgcccagtcagctatc
gtgaagcgtgctgtggcccttggtcggtacttgcaaaatcctttggcgatggttgcaaca
ctttgtggacccgggaaagagatactgtcatggaaactacacccccttgaacagttcctt
actcccgatgagaagtatgaagttgttgagcaagtaatggtcgatgcgacaaatcagatc
ggctttgatgttaatcttgctgctagccatgagtggcatttttccactttgcagtttgtt
gctggtctgggaccgcgcaaagcttcagctttgcagaaggagttggtaagagagggatcc
atttttagtcgcaaggagctggtgaaacccttaggcaggaaagtattcatgaatgcgtct
gggtttttacgcgtccgacgaagtggtgctgctgcagctagtgcccagatcattgatctt
cttgaggatacaaggatccatcctgaatcatatgcattggcaaagaatttggccaaggat
gtctgtgccggggatggagttgaagcgaatgagatggatgatgatgagcaagagatggca
attgagcatgtgagagagaagcaggatcagcttgaccgtcttgacatagatgaatacagc
agaagcatcggagatgataagagagaaacgctgattgacataaagttggagctactgtgt
ggtttcaaagatcggaggaccccttatgccgagccaagtccagatgaggagttctggttg
ctttctggtgaaactgaggacaacatatcagatggaaggattgttcaagtaactgttcgg
catatacaagataaccgaataatttgtacctttgattctgggttaaaagccatagttatg
ggagacaactattctgatgatggctttgatctagaatcactgcagttacatgaaggcgat
gtattaactggcaaaattaagaatgtgaataaaaataggttcatagtttacctaacatgc
aagcagagtgaaataaatagatggccattctcgagaagtaaccatgatccatactatcgt
ccacaaaaggtggttctggcccaggatgacaaggctcggaaacaaaaggaagcgaagaaa
catttcaagcccaggatgattgttcatcctcactttcagaatttgacggcggaagaggca
atgcagttcctgggggacaaagagcctggcgagaaagtcattcggcctagctctaggggc
ccatcatttctaacgcttaccctgaagatatttgatggtgtctttgcacacaaggagata
accgaaagtggaaaggatcataaagatattacaagtttgcttcgcctcggaaaaacactg
accattggtgatgaaacttttgaagatcttgatgaggtaatagaccgatatgtggatcca
ttggtaggccacctgaaaagcatgctctcttatcgcaaattcaggaaagggttaaaaggc
gaagttgatgatatgttgagggctgagaaatcagagaatccaatgagaatagtctattgt
tttggcatatctcatgaacatccaggcaccttcatattatcttacatcaggagtacaaac
ccacatcatgagtatgttgggttatacccaaagggcttcagattccggaagaaagatttt
gacagcattgatcgtcttgtgtcatattttcaaaaacatattgacaaaccaccacctgat
gctggcccttcaatgcgaaatgttgcggcaatggtacctatgaaaaattcagcttggggt
tctggtggtgcgaatgacggaaggaggggagatggtgataatgatagggacagacctttt
tctggaagatcaggaggcaggtttgattcaaggaacagttctggcggccgtggacgtggg
cgtggtcggggccgaggtaactttggcagtgatggtgatggtggcggtggtggaggatgg
actgataacataggcagtgggggaggtgcgtggggcactggcggagatgggggcgacagc
aaccgtggcggcggtggggatggaggctggggcgcacctgctgctgccgctgccactgac
ggtggcacaggaggctggggtacacctgctgccgctgctgccactgacggtggtgccgga
ggctgggcagcagctactactggtgctgctggtgacgactcaggatggggcagcgccaag
aaggccgtcccagcacaggattctggaggtgggtgggggtctggcggtgggggctggtga
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integrated database retrieval system
