KEGG   Triticum dicoccoides (wild emmer wheat): 119348841
Entry
119348841         CDS       T07278                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    119348841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tdc04121]
    119348841
   03036 Chromosome and associated proteins [BR:tdc03036]
    119348841
Enzymes [BR:tdc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119348841
Ubiquitin system [BR:tdc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119348841
Chromosome and associated proteins [BR:tdc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     119348841
    Noncanonical PRC1 (PRC1.1)
     119348841
    Noncanonical PRC1 (PRC1.3/1.5)
     119348841
    Noncanonical PRC1 (PRC1.6)
     119348841
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-UDP zf-RING_4 zf-RING_10 zf-rbx1 zf-RING_6 zf-Nse zf-RING_11 ZNF512_C2HC
Other DBs
NCBI-GeneID: 119348841
NCBI-ProteinID: XP_037472728
LinkDB
Position
1B:572792568..572797532
AA seq 498 aa
MPAQKRPHPSPDADDGHVREEEAAAAAGAAGSDTEGGGGVQRAANGGSAELAKDGGGDSD
AGEDDEEEEEQRKQQQQQDEHEEGGGSGGDDEDGDDSPSSESDAADVDEFILVKLMDIRK
EVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCKSRRSLRDDPNFD
ALILALYPDIDKYEEEELAFGEEEKTRNKKIQDSIAETFRRQTEALVKKRSNAKAIASTR
KTRGSMRTKKRGRTSSPDNAPTDIDDDEREENGNDGSKESSSVDDRSPDVKMKRARRWPV
PRSSPAKTIGSVDSSYEENDDLGGARDILATSPLRGEMLAWGKNGTRSQTRHGSAGGSSG
RMVKGGRVAKLVDHLRNADEFDTKFNLYLALTPVDGQSMPKLEKSYLSCQPTFSVSHLCQ
FVALQLSRQAAEVEIYFRKNSRNGSLKTEETSADDGAKPERLDGLERLKEENSLSELYPM
LASGVGDLELLYSVKAQG
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgcccgcgcagaagcgcccgcacccgtcgcccgacgcggacgacgggcacgtccgggag
gaggaggctgccgctgccgccggggccgccggctccgacacggagggcggcggcggcgtc
cagagggccgccaacgggggctccgcggagctggccaaggacggtggcggcgattccgat
gcgggggaggacgacgaggaggaggaggagcagcggaagcagcagcagcagcaggacgag
cacgaggaaggcggcggcagcggcggggacgacgaggacggcgacgacagcccgtcgtcg
gagagcgacgccgccgacgtggacgagtttatactagtgaaattgatggatatacggaag
gaagtgcagtgccctatatgcttaggcattatccggaaaacaagaacggttatggagtgt
ttgcaccggttttgtagggactgcattgataaatccatgcggcttggaaataatgaatgc
ccagcatgccgcactcactgcaagagcagacgttccttgagggatgatcctaattttgac
gctttaattctagctttgtatccagacattgacaagtacgaggaagaggaacttgctttt
ggtgaagaagagaagactcgcaacaaaaagattcaagattccattgctgaaacatttcga
agacaaacagaagcacttgtgaagaagcgctccaatgcaaaagcaatagcttctacaaga
aagacccgtgggagtatgcggacaaagaagagaggacggactagttctcctgataatgcc
ccaactgacattgatgatgacgagagagaagaaaatggcaatgatggcagcaaagaatcg
tcttctgttgatgatcgctcaccagatgtcaagatgaaaagagctcggaggtggcctgtg
ccacgatcatcccctgctaagactattggcagtgttgatagcagctacgaggagaatgat
gatttgggaggtgccagagatatcttggccacttctccactgcggggagagatgcttgcc
tggggcaaaaatggcacccgcagtcagactcgacatggcagtgccggtggctccagtgga
aggatggtcaagggcgggcgtgttgccaagttggtggatcatctccgtaatgctgatgaa
tttgataccaagttcaacttgtacctcgctctaactccggttgatggacaaagcatgcct
aaactggaaaagtcctatctcagctgccagccaacattctctgttagccacctatgccag
tttgttgctcttcagctgtcacggcaagccgcagaggtggagatatacttcaggaagaac
tccagaaacgggtcccttaaaaccgaagaaaccagcgcagacgacggggcgaaaccggag
cggctcgacggcctggaaaggctcaaggaagagaattcgctttcagagctgtaccctatg
ctcgcctctggtgttggagacctggagctgctgtactccgtgaaagcgcagggctag

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