KEGG   Triticum dicoccoides (wild emmer wheat): 119348954
Entry
119348954         CDS       T07278                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119348954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119348954
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     119348954
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     119348954
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 119348954
NCBI-ProteinID: XP_037472859
LinkDB
Position
1B:complement(591630203..591636902)
AA seq 817 aa
MRGLRADAGGGGGGASSSSTSTAENSRFDSGQYSFFGKAPLEGLELGGSLADDGGLDGGY
GGGGFGGHDDGAYQLSPVGEEIDCMSNLSEIDDLASTFAKLNRSISGARNPGVIGDRRSI
SRESSLTTDWAQEAEFSNWVDHDILDSDEFQDSKQLCPQPQYLPQFGESKPLSRTSSYPL
EPLQHRSSEPILGHRSPSFTSYPPPGGGGLSYPAQGLTRHSSIPSPGAGYQMGSPSSSLT
GSPYNMTGLPHGLRLGRSMSYTSADLYANNLLQNEWPNQAGSHAFEHLNLQPSLLQQQLS
FPGSSMSSLLFSQQQQQQQRLSLVQPLHHHNYLNMQPHLYHHHSPEIIGRFDHIPSVPSP
RDKRSRSGRGKHSIRFSQQQSDTASQNVDTGGTKFRSKYMSSEEIDTILRMQHSGSHSSD
PYVDDYYHQACIAKRSVNSQKKVNFSPMSIKDSHSKSRSGGDQHSYLKVDSLGRVSFSSI
RRPRPLLEVDIPASGDGHKSSTRPLEKEPMLAARITVEDGICLLLDVNDIDRVLQSSQAQ
DSSFQLRRRRQVLLEGLATSLELVDPFGPNKPGNSSGLAPTDDLIFLRIVSLPKGRKLLA
RYLRLLAPGSELTRIVCMAIFRHLRSLFGGLPSDSGAAETTVSLAKTVSSCVHHMELSAL
SACLAAVVCSSQQPPLRPLGSSAGDGAALIIKSVLDRATELLADPHSAANYSRSTRSLWQ
ASFDAFFGLLTKYCDSKYGSILQRFSMQGSNSMAGPEASKAVSREMPVELLRASLPHTSE
EQRQMLLDFARKSMPVIGYNHSGASGGHSTTSEPVPG
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgaggggcctccgggcggacgccggcggcggcggcggtggcgcctcctcctcgtcgact
tccaccgcagagaactcgcgcttcgactcggggcagtattccttcttcggcaaggcgccg
ctggaggggctggagctcggcggcagcctggcggatgacgggggcctggacggcggctat
ggcggcggcggcttcggtgggcacgacgatggggcttaccagctgtctcctgtgggggaa
gagattgattgcatgagtaacttgtctgaaattgatgatcttgcaagcacgttcgcaaag
ttgaaccgaagtattagtggagcaaggaatcctggtgttattggtgatagacgatcaatt
tccagggaaagttctttgactaccgactgggcccaggaagcagagttctcgaattgggtg
gatcatgatatactggacagcgacgaatttcaagacagcaaacaattgtgtcctcagcca
cagtatttgcctcagttcggagagtcaaaaccattgagccgaacatcatcctatcccctg
gagccactacaacaccgctccagtgaacctattctgggacatagatctccttcatttaca
tcctatcctccaccaggtggtggtggattatcttatcctgcacaaggtcttacgcggcac
tcgagcattccatcacctggtgctggttaccaaatgggttctccaagttcgtcacttact
ggttctccatataacatgactggtctacctcatggactgcggttggggcgaagcatgtct
tacacttctgcagatctatacgcgaacaacttgctgcaaaacgaatggccaaatcaagct
ggttcgcatgcttttgagcatcttaatctacagcccagtttattgcagcaacaactatct
tttccgggcagttcaatgtcttcgttgctattttctcagcagcaacagcagcagcagagg
ttgtcactagttcaaccgcttcatcatcacaattacctaaacatgcagcctcacttgtat
caccatcattccccagagataataggcaggtttgatcatattcctagtgtgccttcacca
agggacaagagatcaaggtcaggaagaggaaaacacagtatacgcttttctcaacaacaa
tctgatacagctagccagaatgttgacactggaggaacaaaattcagatcaaagtatatg
tcatctgaagagattgatactattttaagaatgcagcactctggcagtcacagcagtgat
ccttacgtcgatgactactaccaccaagcttgtatagccaaaagatccgtcaattctcag
aagaaggtgaatttctcccccatgtcaataaaagactcccactcaaagtctaggtctggt
ggtgatcagcattcatacctgaaggttgattctcttggaagagtgtcattctcttccata
cgtaggcctcgccctcttcttgaagttgatattcctgcatctggtgatggtcacaagtca
tctacgaggccactggagaaagagccaatgctggcagccagaattaccgttgaggatggt
atatgtcttcttctagatgtaaatgacattgaccgtgtgttacagtctagccaggcacag
gacagcagcttccaactgaggcgaaggcgacaggtcctccttgaaggcttagctacatca
cttgagcttgtcgacccttttggccccaacaaacctggcaattcatctggattggccccg
acggatgaccttatttttctccgcattgtttctctccctaaaggacgcaagctcttggca
cggtatctccgacttcttgcccctggaagtgagctaacccgcatagtttgcatggctatc
tttcggcatcttaggagcttgtttgggggtttgccatcagattctggtgctgcagaaaca
acagttagtcttgccaagaccgtgtcctcctgcgtgcatcacatggagctcagtgccctc
agcgcctgcctcgcagctgttgtctgctcgtcgcagcagccacctctccgccctcttggc
agctctgctggtgatggtgctgctctaatcatcaaatcagtactggacagagcaactgag
ctactggccgatccccattctgcagccaactacagcaggtcaacccgttcgctttggcag
gcgtcattcgatgccttctttgggcttctgacaaaatactgcgacagcaagtatgggagc
attctgcagaggttcagcatgcagggatccaactcaatggctggacctgaagcctcgaag
gccgtcagcagggagatgcccgtcgagctactgcgtgcaagccttccgcacaccagcgaa
gaacaacgccagatgcttcttgactttgctcggaaatccatgcctgtgatcggctacaac
cactcgggcgctagcggcgggcattctactacttccgaacctgttcccggttaa

DBGET integrated database retrieval system