Triticum dicoccoides (wild emmer wheat): 119349155
Help
Entry
119349155 CDS
T07278
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119349155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119349155
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
119349155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
119349155
NCBI-ProteinID:
XP_037473062
LinkDB
All DBs
Position
1B:618461762..618466058
Genome browser
AA seq
203 aa
AA seq
DB search
MVGTPSSPVVNVYPLANYTFGTKEAKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ
EHNHPHILLLQIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAVNSPSFPPNWQVGECVA
EWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQ
RYGPVISTIPQQLSRFQFNMVSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcactccgtcctcgccggtggtgaacgtgtacccgctcgccaactacacgttc
ggcaccaaggaggccaagatggagaaggacacctccgtcgccgaccgcctcgctcgcatg
aaggtcaactacatgaaagaaggaatgcgaacaagtgttgaagcaatcctattggtgcaa
gagcacaaccacccccacatactgttgttgcaaattggaaacacattttgcaaacttccc
ggtggacggttgaagcctggagaaagtgaaattgagggcctgaaaaggaagctgtgcagc
aagcttgcagttaactcaccttcctttccacctaactggcaggttggagagtgtgttgct
gaatggtggaggccaaactttgaaaccgtgatgtatccttactgccctccacatataaca
aagcccaaggagtgcaagaagcttttcattgttcacctaactgaaagggagtatttcgct
gttccaaggaacttgaagctacttgctgttccactgtttgaactatatgacaatgttcag
cggtacggaccagtgatttccaccatcccgcagcagctgtccaggttccagttcaacatg
gtgagctcgtaa
DBGET
integrated database retrieval system
