Triticum dicoccoides (wild emmer wheat): 119349689
Help
Entry
119349689 CDS
T07278
Name
(RefSeq) zinc finger CCCH domain-containing protein 27-like
KO
K13192
RNA-binding protein 26
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdc01009
]
119349689
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119349689
03041 Spliceosome [BR:
tdc03041
]
119349689
Protein phosphatases and associated proteins [BR:
tdc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119349689
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
119349689
Spliceosome [BR:
tdc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119349689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
RNA_bind
RRM_PARP14_3
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
119349689
NCBI-ProteinID:
XP_037473671
LinkDB
All DBs
Position
1B:687148916..687156688
Genome browser
AA seq
925 aa
AA seq
DB search
MHKGSIAQALDADKIEVPSPKEESNSTDSEAATDTENFEISDDDDDDRNHKHRRREAMPQ
PFGESIEEQAAGRPFKRRLRISGNGQPFGGADSRGEAQNNFIPKFKRRPGPGAHSRGGRV
NQSFHSASAAARPPMARGRGRNGAPWTHHDPRFNTLDMIDFASQMASQGPPTHPNLFMGP
PLPSGGGAQNGPWGPYGFMPGMPNGMMDPIHPLGMQGPIQPPLIDLGMPRQRCRDFEERG
FCLRGDMCPMEHGVNRIVVEDMQSLSQFNLPVSVPNAPGLGIQSETGTAHVNLTNLGGSK
GVPAKDIKSGVADNPSKLNGSTASAVADADVYDPDQPLWNNERPEASSAGFAHTNDGIWN
AETSSYEAGWEHANQGFAADDSQNPKSSVWGRIASKRKSGPGKTANTTSTSATGNQRSDY
NDDMAPSTVQVKPASKDTNGRPSSRMSADVGRQSNSRTSHKASRTLYVNGIPPESNRWEA
LLSHFEKFGQVIDIYVPANSEKAFIQFSKREEAEAALKAPDAVMGNRFIRLWWANRDRIT
DEGDGRISAKPPLSNSALPQPSSSNRGKDLQSTTPRASSGSSASGPGIGPKKLPANSITS
IPPPAPKRQENLEMLEAIRKKQDMLAQQRDELLQRLEKYAKQTSSANSVKQAEAGGKTVG
SNTVGKVGDVSSMNTGTEGPQEVAGTLEKKISGELASSSPKYAPTSTQKPAVAAKQLTPL
LAPPQNRFKLDNRTTSFRILPPLPPEIAKETVLKDHFAAFGELSSVVLEDTEAHNHDTTL
KPSLSCSACVTYATRQSAEKAFISGKSCKGHMLRFMWLTASPGSNNQSRPQKSLIPVRPT
GISGQTGNMTSESQSPVGKISSAATSATAAIPHSESVPTAESSKIFPIGISKELSTSSSL
SSNVECPPGNDSTMNAVFTDPDVPQ
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagggtctatagctcaagcattggatgctgacaaaatagaagttccttcacca
aaggaagaaagcaattccaccgattcggaagctgctacagatactgaaaactttgaaatt
agtgacgacgacgatgatgatcgtaatcacaagcaccgaagaagagaggctatgcctcaa
ccttttggtgagagtatcgaagagcaagctgcagggaggccttttaaaagaaggctcagg
atttctggtaatgggcagccttttggtggagctgattcacgtggggaagcacagaacaac
ttcataccaaaattcaagcggcgtcctggaccaggagctcacagtcggggaggtagagtg
aaccagtccttccattcagcttctgctgctgctcgccctcctatggcacggggaagagga
cggaatggtgcaccctggactcatcatgacccaagatttaacacacttgacatgattgat
tttgcatcacagatggcctcacaaggaccacccacacatcctaacttatttatgggtcct
ccactgccgagtggcggtggtgctcaaaacggtccgtggggtccgtatggatttatgcct
ggaatgcctaatggaatgatggatccaattcacccacttggaatgcagggccctattcag
cctcctttaattgatcttggcatgcctcgtcagcgttgtagagactttgaggagcgtgga
ttttgcttgagaggggatatgtgccccatggagcatggtgtaaatagaattgttgttgaa
gatatgcagagcctatcacagttcaatcttccagtctcagttccaaatgctccaggacta
ggtatccaaagtgagacagggactgctcatgttaacttaacaaacttagggggcagtaaa
ggtgttcctgcaaaagatatcaaatctggtgtggcagataacccatcgaagctaaatgga
agcactgcttcagctgttgctgatgctgatgtatatgatcctgatcagcccctgtggaac
aatgaacggcctgaagcatctagtgctggttttgcacatactaatgatggaatatggaat
gctgaaacctcaagctatgaagcagggtgggagcatgcaaaccagggttttgcagctgat
gattcacaaaatccaaagtcttctgtttgggggagaatagcatcaaagagaaaatccggg
cctggtaaaacagctaatactacatcgacaagtgcaactggaaaccaaagaagtgactac
aatgatgatatggctcctagcactgtccaagtaaagcctgcttctaaggatactaatggt
cgacccagttcaagaatgtctgcagatgtgggccggcaaagtaatagtaggacctctcac
aaagcatctcgcacactttatgtaaatggcattccaccagaaagcaacagatgggaggcc
cttctgtcgcacttcgaaaaattcggtcaagtaatagatatatatgttccagctaacagt
gagaaagcttttatccagttctctaaaagggaagaagctgaagctgccctaaaagctcca
gacgctgtgatgggaaaccgttttataaggctatggtgggcgaacagagacaggattact
gacgagggagatggtagaatctctgcgaaacctccgctgtcaaattctgcccttccccaa
ccatcttcatccaacagaggcaaggatcttcaatctacaactccaagggccagttctgga
tcttctgcatcaggccctggtataggtcctaaaaagttgcctgccaacagtattacgtca
atacctccccctgctcccaaaaggcaagaaaatctggaaatgctggaagcaattcgtaaa
aaacaagatatgttagctcagcagcgtgatgagttacttcagcggttagagaaatatgcg
aaacaaacaagttcagcaaattcagtaaaacaggcagaggctggtggaaaaacagttggg
tcaaacactgtggggaaagtgggcgatgtcagttccatgaacactgggacagaagggccg
caggaggtcgctggtacactggaaaagaaaatttctggggagttggcttcatcttcccca
aaatatgctccaacatccacacagaaaccagctgtagctgcaaagcagctaacacctctg
ttagcaccaccgcagaataggtttaagcttgacaaccggaccacatcgtttaggatcctt
cctcctttgccacctgaaatcgcaaaagaaactgtcttgaaagatcattttgcagcattc
ggtgagctttcatctgttgtactggaagacactgaagcccacaaccatgatacaacctta
aagccttccctgagttgctcggcttgtgtgacgtacgcaacgcggcaatctgctgagaaa
gcatttattagtggcaaatcttgtaaagggcacatgctacggtttatgtggttgacggcc
tctcctggctctaataaccaatcgagacctcagaaaagtttaattcccgtcaggcccact
ggcatctcaggacaaactggcaacatgacatctgagtcccaaagccctgttgggaaaatc
tcatctgctgccacatctgctacagcagccattcctcatagtgaatccgttccaactgca
gaaagttcaaagatttttcctattgggatttccaaagaattatctaccagttcctctcta
tcatcaaatgttgagtgtcctcctggaaatgattccacaatgaatgccgtctttacagac
ccggatgttccacagtga
DBGET
integrated database retrieval system
